RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 ANAPC7Q9UJX3 599 aa14.8□□□□□ -0.04
CBX3-203ENST00000409747 TMX2-CTNND1H3BSU7 103 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 TK2O00142 265 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 HTRA2O43464 458 aaPredicted RBP14.79□□□□□ -0.04
CBX3-203ENST00000409747 CPP00450 1065 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 RARAP10276 462 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 CYP2A6P11509 494 aaPredicted RBP14.79□□□□□ -0.04
CBX3-203ENST00000409747 AMPD1P23109 780 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 UBASH3AP57075 661 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 TMPRSS3P57727 454 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 ZBED6P86452 979 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 FANCCQ00597 558 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 KRT81Q14533 505 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 LRRC49Q8IUZ0 686 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 PLA2G15Q8NCC3 412 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 WDR36Q8NI36 951 aaKnown RBP14.79□□□□□ -0.04
CBX3-203ENST00000409747 PDCD6IPQ8WUM4 868 aaKnown RBP14.79□□□□□ -0.04
CBX3-203ENST00000409747 FUBP1Q96AE4 644 aaKnown RBP14.79□□□□□ -0.04
CBX3-203ENST00000409747 BBC3Q96PG8 261 aaPredicted RBP14.79□□□□□ -0.04
CBX3-203ENST00000409747 MGME1Q9BQP7 344 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 THAP2Q9H0W7 228 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 B4GALT6Q9UBX8 382 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 BAHCC1Q9P281 2608 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 ASXL3Q9C0F0 2248 aa14.79□□□□□ -0.04
CBX3-203ENST00000409747 CCDC187A0A096LP49 1063 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 GOLGA6L19H0YKK7 550 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 NTN3O00634 580 aaPredicted RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 MAFKO60675 156 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 CR2P20023 1033 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 VIPR1P32241 457 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 TRIM23P36406 574 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 CXADRP78310 365 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 EIF3IQ13347 325 aaKnown RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 HADHQ16836 314 aaKnown RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 MARC1Q5VT66 337 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 LSM14AQ8ND56 463 aaKnown RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 CCDC74AQ96AQ1 378 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 NUS1Q96E22 293 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 SLC46A1Q96NT5 459 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 GFM1Q96RP9 751 aaKnown RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 NUP85Q9BW27 656 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 CBX8Q9HC52 389 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 PCDH18Q9HCL0 1135 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 HAUS2Q9NVX0 235 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 RAI2Q9Y5P3 530 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 SYCE3A1L190 88 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 TMEM202A6NGA9 273 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 MYO1FO00160 1098 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 PSMD11O00231 422 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 ATXN7O15265 892 aaPredicted RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 PEX11BO96011 259 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 MYCLP1P12525 358 aaPredicted RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 KRT10P13645 584 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 TCF4P15884 667 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 PBX1P40424 430 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 MMP13P45452 471 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 SLC25A11Q02978 314 aaKnown RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 TCEA2Q15560 299 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 PNCKQ6P2M8 343 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 TAF8Q7Z7C8 310 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 LUZP1Q86V48 1076 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 TP53INP2Q8IXH6 220 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 OR1E3Q8WZA6 343 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 LIN37Q96GY3 246 aaPredicted RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 NAF1Q96HR8 494 aaKnown RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 COQ10AQ96MF6 247 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 STRADBQ9C0K7 418 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 FGF22Q9HCT0 170 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 PHPT1Q9NRX4 125 aaPredicted RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 ETNK2Q9NVF9 386 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 CAPN11Q9UMQ6 739 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 PHTF1Q9UMS5 762 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 LUC7L2Q9Y383 392 aaKnown RBP14.78□□□□□ -0.04
CBX3-203ENST00000409747 PCDHGC4Q9Y5F7 938 aa14.78□□□□□ -0.04
CBX3-203ENST00000409747 RP1P56715 2156 aa14.77□□□□□ -0.04
CBX3-203ENST00000409747 D6RAR5 112 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 HEXIM1O94992 359 aaKnown RBP14.77□□□□□ -0.05
CBX3-203ENST00000409747 CYP1A2P05177 515 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 NFKBIBQ15653 356 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 CNGA3Q16281 694 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 USP45Q70EL2 814 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 NDUFAF2Q8N183 169 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 FAM46DQ8NEK8 389 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 GPR156Q8NFN8 814 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 NOD2Q9HC29 1040 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 LCMT1Q9UIC8 334 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 PTPRQQ9UMZ3 2332 aa14.77□□□□□ -0.05
CBX3-203ENST00000409747 A8MX80 341 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 KLK10O43240 276 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 RPLP0P05388 317 aaKnown RBP14.76□□□□□ -0.05
CBX3-203ENST00000409747 TPM3P06753 285 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 ITGA2BP08514 1039 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 PNLIPP16233 465 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 GLB1P16278 677 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 GM2AP17900 193 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 SSR1P43307 286 aaKnown RBP14.76□□□□□ -0.05
CBX3-203ENST00000409747 PDX1P52945 283 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 ARHGEF7Q14155 803 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 ARMC12Q5T9G4 340 aa14.76□□□□□ -0.05
CBX3-203ENST00000409747 ALKBH5Q6P6C2 394 aaKnown RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms