RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 KRT80Q6KB66 452 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 DET1Q7L5Y6 550 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 PARP8Q8N3A8 854 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 SH3RF2Q8TEC5 729 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 LATS2Q9NRM7 1088 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF232Q9UNY5 417 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 ENPP3O14638 875 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 GRID2O43424 1007 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 SRP72O76094 671 aaKnown RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 F9P00740 461 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 PCNAP12004 261 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 UGT1A6P19224 532 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 NPY2RP49146 381 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 CDKN1CP49918 316 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 RAB10P61026 200 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 PPIDQ08752 370 aaKnown RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 ATXN7L2Q5T6C5 722 aaPredicted RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 CYS1Q717R9 158 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 NSUN5Q96P11 429 aaKnown RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 DRC3Q9H069 523 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 SMG9Q9H0W8 520 aaKnown RBP13.43□□□□□ -0.26
COL6A2-204ENST00000409416 RNF186Q9NXI6 227 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 GTF2IRD1Q9UHL9 959 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 BCAP29Q9UHQ4 241 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 DERAQ9Y315 318 aa13.43□□□□□ -0.26
COL6A2-204ENST00000409416 ANKRD33BA6NCL7 494 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 UBXN8O00124 270 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 DYNC1I2Q13409 638 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 TUSC3Q13454 348 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 VARS2Q5ST30 1063 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 TTC30BQ8N4P2 665 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 PTGR2Q8N8N7 351 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 OR10Q1Q8NGQ4 319 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 RP9Q8TA86 221 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 IGSF8Q969P0 613 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 KATNBL1Q9H079 304 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ATP13A1Q9HD20 1204 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 CD274Q9NZQ7 290 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ZNHIT2Q9UHR6 403 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 PCDHB7Q9Y5E2 793 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF839A8K0R7 811 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF487B1APH4 448 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 SNAP91O60641 907 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 CABYRO75952 493 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ANXA9O76027 345 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 GABRB3P28472 473 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 DPP6P42658 865 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 LPIN1Q14693 890 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 IL23RQ5VWK5 629 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 MYO1HQ8N1T3 1032 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 CLHC1Q8NHS4 586 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 GFM2Q969S9 779 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ACOX2Q99424 681 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 UBAP1Q9NZ09 502 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ANGPTL3Q9Y5C1 460 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF638Q14966 1978 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 RNF103-CHMP3A0A140T963 221 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 FBXO21O94952 628 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 RPL10P27635 214 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 TPD52P55327 224 aaPredicted RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 PSME3P61289 254 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 FASTKQ14296 549 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF697Q5TEC3 545 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 FBXL22Q6P050 247 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 TXNDC5Q8NBS9 432 aaKnown RBP13.42□□□□□ -0.26
COL6A2-204ENST00000409416 CIB1Q99828 191 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 OCEL1Q9H607 264 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 TRHDEQ9UKU6 1024 aa13.42□□□□□ -0.26
COL6A2-204ENST00000409416 A0A1B0GTW7 788 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 BTN3A1O00481 513 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 APOA4P06727 396 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 CKMP06732 381 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 BMP1P13497 986 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 TMEM173Q86WV6 379 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 IFNL1Q8IU54 200 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 CENPLQ8N0S6 344 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 OR4K2Q8NGD2 314 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 LRTOMTQ8WZ04 291 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 KLHL32Q96NJ5 620 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 UBE2OQ9C0C9 1292 aaKnown RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 ZDHHC4Q9NPG8 344 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 HPS4Q9NQG7 708 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 VPS28Q9UK41 221 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 AAR2Q9Y312 384 aaKnown RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 WARSP23381 471 aaKnown RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 SERPINH1P50454 418 aaKnown RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 ADGRE1Q14246 886 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 UGP2Q16851 508 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 NADK2Q4G0N4 442 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 PKN3Q6P5Z2 889 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 FRA10AC1Q70Z53 315 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 ZNF366Q8N895 744 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 GPR22Q99680 433 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 GPR63Q9BZJ6 419 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 MAF1Q9H063 256 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 MRPL46Q9H2W6 279 aaKnown RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 C6orf203Q9P0P8 240 aaPredicted RBP13.41□□□□□ -0.26
COL6A2-204ENST00000409416 PCDHB9Q9Y5E1 797 aa13.41□□□□□ -0.26
COL6A2-204ENST00000409416 MYO10Q9HD67 2058 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms