RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 MRPS18BQ9Y676 258 aaKnown RBP12.91□□□□□ -0.34
CHRNA1-203ENST00000409219 TNRC6AQ8NDV7 1962 aaKnown RBP12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 IGHV1OR21-1A0A087WYE8 117 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 GOLGA6L3A6NEY3 463 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 MKRN2OSH3BPM6 223 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 FGF1P05230 155 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 KELP23276 732 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 GPR3P46089 330 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 MC1RQ01726 317 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 TRNP1Q6NT89 227 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 ASB18Q6ZVZ8 466 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 ENOSF1Q7L5Y1 443 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 ZDHHC17Q8IUH5 632 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 TRIM59Q8IWR1 403 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 EFCAB3Q8N7B9 438 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 EXOC2Q96KP1 924 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 CTRCQ99895 268 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 MAGEH1Q9H213 219 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 PLCB1Q9NQ66 1216 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 TMEM248Q9NWD8 314 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 HPCAL4Q9UM19 191 aa12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 TMEM184BQ9Y519 407 aaPredicted RBP12.9□□□□□ -0.34
CHRNA1-203ENST00000409219 PPM1DO15297 605 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 ZW10O43264 779 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 RAMP2O60895 175 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 RECQL5O94762 991 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 PDGFAP04085 211 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 BMP6P22004 513 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 TNFRSF8P28908 595 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 USP8P40818 1118 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 RHOAP61586 193 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 SQSTM1Q13501 440 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM102AQ5T9C2 384 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 MAMDC2Q7Z304 686 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 ZSWIM9Q86XI8 627 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 NAGSQ8N159 534 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 PELI3Q8N2H9 469 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 CPT1CQ8TCG5 803 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 CFAP57Q96MR6 1250 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 SUDS3Q9H7L9 328 aaPredicted RBP12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 CARS2Q9HA77 564 aaKnown RBP12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 TAAR2Q9P1P5 351 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 LHX3Q9UBR4 397 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 ATP6V1DQ9Y5K8 247 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 ST14Q9Y5Y6 855 aa12.89□□□□□ -0.35
CHRNA1-203ENST00000409219 ZSCAN5CA6NGD5 496 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 TTLL8A6PVC2 850 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM72CH0Y354 149 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 PSMA7O14818 248 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 BUB1O43683 1085 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 KDELR3O43731 214 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 STK17BO94768 372 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 CLDN1O95832 211 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 DLGAP3O95886 979 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 MBD3O95983 291 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 HOXC4P09017 264 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 RHOQP17081 205 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 F8A1P23610 371 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 AK4P27144 223 aaPredicted RBP12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 TRIM23P36406 574 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 SCNN1AP37088 669 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 STAT1P42224 750 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 STAT5AP42229 794 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 RIPPLY3P57055 190 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 SNX16P57768 344 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 APBA1Q02410 837 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 RALGDSQ12967 914 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 TSR1Q2NL82 804 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 RAB6CQ53S08 254 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM72AQ5TYM5 149 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM72DQ6L9T8 149 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 RWDD4Q6NW29 188 aaKnown RBP12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 ERAP2Q6P179 960 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 TMEM71Q6P5X7 295 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 KDELC2Q7Z4H8 507 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM72BQ86X60 149 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM114A1Q8IWE2 563 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 SHC3Q92529 594 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 GSDMAQ96QA5 445 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 DPYSL5Q9BPU6 564 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 NCAPGQ9BPX3 1015 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 GSDMCQ9BYG8 508 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 KLC2Q9H0B6 622 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 RAB6CQ9H0N0 254 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 WDR26Q9H7D7 661 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 APMAPQ9HDC9 416 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 TMEM51Q9NW97 253 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 OR12D3Q9UGF7 316 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 ATP8A1Q9Y2Q0 1164 aa12.88□□□□□ -0.35
CHRNA1-203ENST00000409219 FAM170AA1A519 330 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 FUCA1P04066 466 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 FURINP09958 794 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 GM2AP17900 193 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 COPB1P53618 953 aaKnown RBP12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 KRT85P78386 507 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 MC2RQ01718 297 aa12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 NRG1Q02297 640 aaPredicted RBP12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 ILF3Q12906 894 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHRNA1-203ENST00000409219 BIRC2Q13490 618 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms