RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 BBOF1Q8ND07 529 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 PIP4K2CQ8TBX8 421 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 OR8D1Q8WZ84 308 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 SEC14L1Q92503 715 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 ARRDC3Q96B67 414 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 ZBTB9Q96C00 473 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 GABRG3Q99928 467 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 TRIM56Q9BRZ2 755 aaKnown RBP8.4□□□□□ -1.06
GPC3-203ENST00000406757 EDEM2Q9BV94 578 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 FSD1LQ9BXM9 530 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 TDRD1Q9BXT4 1180 aaKnown RBP8.4□□□□□ -1.06
GPC3-203ENST00000406757 TPSD1Q9BZJ3 242 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 SUV39H2Q9H5I1 410 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 LRRC40Q9H9A6 602 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 VPS45Q9NRW7 570 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 ZDHHC18Q9NUE0 388 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 TSR3Q9UJK0 312 aaKnown RBP8.4□□□□□ -1.06
GPC3-203ENST00000406757 PCDHB9Q9Y5E1 797 aa8.4□□□□□ -1.06
GPC3-203ENST00000406757 TPRP12270 2363 aaKnown RBP8.4□□□□□ -1.07
GPC3-203ENST00000406757 SPEGQ15772 3267 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CXorf51AA0A1B0GTR3 108 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 LOC285095A0A1B0GVY8 99 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 C4orf47A7E2U8 309 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 TRAFD1O14545 582 aaPredicted RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 GIPC1O14908 333 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 MID1O15344 667 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 PSMD3O43242 534 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CTIFO43310 598 aaKnown RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 BUD23O43709 281 aaKnown RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 FZD6O60353 706 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 RHOBTB1O94844 696 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SUN1O94901 812 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 PGLSO95336 258 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SLC4A1P02730 911 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 ATXN1LP0C7T5 689 aaKnown RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 TIMP2P16035 220 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CES1P23141 567 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SERPINA4P29622 427 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 MAGEA6P43360 314 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 COPAP53621 1224 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 EPHB1P54762 984 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SHC2P98077 582 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 RAD51Q06609 339 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 DHX9Q08211 1270 aaKnown RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 PTPRCAPQ14761 206 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 FASTKD3Q14CZ7 662 aaKnown RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 LAPTM4AQ15012 233 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 MORF4L2Q15014 288 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SLC1A5Q15758 541 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 QPCTQ16769 361 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 ARMC12Q5T9G4 340 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 LRRC8BQ6P9F7 803 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CES3Q6UWW8 571 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 RANBP10Q6VN20 620 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 IGDCC3Q8IVU1 814 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 KLHDC8BQ8IXV7 354 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 KDM1BQ8NB78 822 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 PIH1D2Q8WWB5 315 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SERPINB12Q96P63 405 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 TRIB3Q96RU7 358 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CPEB1Q9BZB8 566 aaKnown RBP8.39□□□□□ -1.07
GPC3-203ENST00000406757 ATP13A3Q9H7F0 1226 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SAYSD1Q9NPB0 183 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CD93Q9NPY3 652 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 CASS4Q9NQ75 786 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 HAUS2Q9NVX0 235 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SYBUQ9NX95 663 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 EBF1Q9UH73 591 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 PPM1HQ9ULR3 514 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 KCTD3Q9Y597 815 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 SPO11Q9Y5K1 396 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 ANKRD36A6QL64 1941 aa8.39□□□□□ -1.07
GPC3-203ENST00000406757 MAP1BP46821 2468 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 TCRBV21S2A2A0A5A6 115 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 LNP1A1A4G5 178 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 GOLGA6CA6NDK9 693 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 GOLGA6BA6NDN3 693 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 C16orf96A6NNT2 1141 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 CCL22O00626 93 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 AURKAO14965 403 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 HTRA2O43464 458 aaPredicted RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 NDST3O95803 873 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 CPP00450 1065 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 C1QTNF9P0C862 333 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 GOLGA6DP0CG33 693 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 HNF1BP35680 557 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 NOVA1P51513 510 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 RPS14P62263 151 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 TUBB4BP68371 445 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 FAM193AP78312 1265 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 TMPRSS15P98073 1019 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 PDIA2Q13087 525 aaKnown RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 CAMK2GQ13555 558 aaPredicted RBP8.38□□□□□ -1.07
GPC3-203ENST00000406757 CUL1Q13616 776 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 SEPT6Q14141 434 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 STARD3Q14849 445 aa8.38□□□□□ -1.07
GPC3-203ENST00000406757 POU6F1Q14863 301 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms