RNA–Protein interactions for RNA: ENST00000406638.6

LSP1-204, Transcript of lymphocyte specific protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LSP1, Length 2,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1-204ENST00000406638 KPNA4O00629 521 aaPredicted RBP16.3■□□□□ 0.2
LSP1-204ENST00000406638 B4GAT1O43505 415 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 CKBP12277 381 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 GNL1P36915 607 aaPredicted RBP16.3■□□□□ 0.2
LSP1-204ENST00000406638 TAF6P49848 677 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 PRKAA1Q13131 559 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 CCDC14Q49A88 953 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 TRAF7Q6Q0C0 670 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 LCLAT1Q6UWP7 414 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 CTU1Q7Z7A3 348 aaKnown RBP16.3■□□□□ 0.2
LSP1-204ENST00000406638 DHFR2Q86XF0 187 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 COLGALT1Q8NBJ5 622 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 CCDC138Q96M89 665 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 GLT1D1Q96MS3 346 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 LGMNQ99538 433 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 CACNA2D2Q9NY47 1150 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 POU2F3Q9UKI9 436 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 FKTNO75072 461 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 ITGB1P05556 798 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 POLBP06746 335 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 NR4A1P22736 598 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 SPRP35270 261 aaPredicted RBP16.3■□□□□ 0.2
LSP1-204ENST00000406638 IDUAP35475 653 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 PHKG1Q16816 387 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 SLC36A3Q495N2 470 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 AGKQ53H12 422 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 ARMCX6Q7L4S7 300 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 ZNF354CQ86Y25 554 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 LSMEM2Q8N112 164 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 SCYL1Q96KG9 808 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 HMX1Q9NP08 348 aaPredicted RBP16.3■□□□□ 0.2
LSP1-204ENST00000406638 SPAG4Q9NPE6 437 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 NOX1Q9Y5S8 564 aa16.3■□□□□ 0.2
LSP1-204ENST00000406638 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 CLPXO76031 633 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 BEST1O76090 585 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 CD4P01730 458 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 S100A1P23297 94 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 EEF1B2P24534 225 aaKnown RBP16.29■□□□□ 0.2
LSP1-204ENST00000406638 OPRL1P41146 370 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 PCYT1AP49585 367 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 CSE1LP55060 971 aaKnown RBP16.29■□□□□ 0.2
LSP1-204ENST00000406638 BFSP2Q13515 415 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 LRP8Q14114 963 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 OXA1LQ15070 435 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 SF3B4Q15427 424 aaKnown RBP eCLIP16.29■□□□□ 0.2
LSP1-204ENST00000406638 BOLA3Q53S33 107 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 TBCELQ5QJ74 424 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 LIPMQ5VYY2 423 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 NEPROQ6NW34 567 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 ERMP1Q7Z2K6 904 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 SLC2A14Q8TDB8 520 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 NSMCE3Q96MG7 304 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 ALPK1Q96QP1 1244 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 CFHR5Q9BXR6 569 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 NDEL1Q9GZM8 345 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 STARD7Q9NQZ5 370 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 UTP6Q9NYH9 597 aaKnown RBP16.29■□□□□ 0.2
LSP1-204ENST00000406638 TCAF1Q9Y4C2 921 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 TRIM64A6NGJ6 449 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 TRIM64BA6NI03 449 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 GPR182O15218 404 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 USP12O75317 370 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 GSSP48637 474 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 LIMK2P53671 638 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 PKDCCQ504Y2 493 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 FAM219BQ5XKK7 198 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 REP15Q6BDI9 236 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 C4orf22Q6V702 233 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 CLEC14AQ86T13 490 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 MFSD2AQ8NA29 543 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 APPL2Q8NEU8 664 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 HMGCLL1Q8TB92 370 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 TDRD1Q9BXT4 1180 aaKnown RBP16.29■□□□□ 0.2
LSP1-204ENST00000406638 RHOBTB2Q9BYZ6 727 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 FANCEQ9HB96 536 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 SLC39A10Q9ULF5 831 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 AP4E1Q9UPM8 1137 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 DGKBQ9Y6T7 804 aa16.29■□□□□ 0.2
LSP1-204ENST00000406638 SBK3P0C264 359 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 ATP6V1B2P21281 511 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 TCEA1P23193 301 aaKnown RBP16.28■□□□□ 0.2
LSP1-204ENST00000406638 MAGEA12P43365 314 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 BRCC3P46736 316 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 SLC7A2P52569 658 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 TRAP1Q12931 704 aaKnown RBP16.28■□□□□ 0.2
LSP1-204ENST00000406638 DSC3Q14574 896 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 ABRAXAS1Q6UWZ7 409 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 PIGZQ86VD9 579 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 RAVER1Q8IY67 606 aaKnown RBP16.28■□□□□ 0.2
LSP1-204ENST00000406638 SPATA6LQ8N4H0 392 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 PXYLP1Q8TE99 480 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 LINC01599Q8WXQ3 324 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 TOP1MTQ969P6 601 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 ZNF669Q96BR6 464 aaPredicted RBP16.28■□□□□ 0.2
LSP1-204ENST00000406638 EHD1Q9H4M9 534 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 SEPT10Q9P0V9 454 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 CD300AQ9UGN4 299 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 OAZ3Q9UMX2 235 aa16.28■□□□□ 0.2
LSP1-204ENST00000406638 LAMA3Q16787 3333 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms