RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 RECQL5O94762 991 aaPredicted RBP19.26■□□□□ 0.67
RTN4-207ENST00000402434 CYP2A6P11509 494 aaPredicted RBP19.26■□□□□ 0.67
RTN4-207ENST00000402434 LHCGRP22888 699 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 CD68P34810 354 aaPredicted RBP19.26■□□□□ 0.67
RTN4-207ENST00000402434 YPEL5P62699 121 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 CNGA3Q16281 694 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 PPM1JQ5JR12 505 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 MEI1Q5TIA1 1274 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 PTAR1Q7Z6K3 402 aaPredicted RBP19.26■□□□□ 0.67
RTN4-207ENST00000402434 NAXDQ8IW45 347 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 SAP25Q8TEE9 199 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 ANP32BQ92688 251 aaKnown RBP19.26■□□□□ 0.67
RTN4-207ENST00000402434 COQ10AQ96MF6 247 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 RBM15Q96T37 977 aaKnown RBP eCLIP19.26■□□□□ 0.674e-8■■■■■ 30.1
RTN4-207ENST00000402434 SLC32A1Q9H598 525 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 PCDH9Q9HC56 1237 aa19.26■□□□□ 0.67
RTN4-207ENST00000402434 PSMD11O00231 422 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 FLRT2O43155 660 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 CBFA2T3O75081 653 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 HNF1BP35680 557 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 NOVA1P51513 510 aaKnown RBP19.25■□□□□ 0.67
RTN4-207ENST00000402434 PTPRRQ15256 657 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 IRF4Q15306 451 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 KDM7AQ6ZMT4 941 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 ZNF567Q8N184 647 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 DEFB124Q8NES8 71 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 ALS2CR12Q96Q35 445 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 TRIB3Q96RU7 358 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 LYSMD1Q96S90 227 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 KCTD5Q9NXV2 234 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 TRHDEQ9UKU6 1024 aa19.25■□□□□ 0.67
RTN4-207ENST00000402434 ARID1BQ8NFD5 2236 aaPredicted RBP19.24■□□□□ 0.67
RTN4-207ENST00000402434 GOLGA6L9A6NEM1 432 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 ANKRD66B4E2M5 251 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 H7C0C1 242 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 ALPIP09923 528 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 RBP3P10745 1247 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 CTPS1P17812 591 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 RBL1P28749 1068 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 EPHA8P29322 1005 aaPredicted RBP19.24■□□□□ 0.67
RTN4-207ENST00000402434 ATP5OP48047 213 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 EPHB1P54762 984 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 EIF3EP60228 445 aaKnown RBP19.24■□□□□ 0.67
RTN4-207ENST00000402434 FZD2Q14332 565 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 PSAPL1Q6NUJ1 521 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 TTC13Q8NBP0 860 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 TRIM58Q8NG06 486 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 SPATA22Q8NHS9 363 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 CAMK1GQ96NX5 476 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 ADGRE3Q9BY15 652 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 PCOLCE2Q9UKZ9 415 aa19.24■□□□□ 0.67
RTN4-207ENST00000402434 CAPN8A6NHC0 703 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 GIPC1O14908 333 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 MT-CYBP00156 380 aaPredicted RBP19.23■□□□□ 0.67
RTN4-207ENST00000402434 ZNF30P17039 623 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 IL9RQ01113 521 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 PDE1CQ14123 709 aaPredicted RBP19.23■□□□□ 0.67
RTN4-207ENST00000402434 ARHGEF7Q14155 803 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 INPP5AQ14642 412 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 ACOX1Q15067 660 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 RPS6KA1Q15418 735 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 TPRG1LQ5T0D9 272 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 CRTC1Q6UUV9 634 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 PID1Q7Z2X4 250 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 KANSL1Q7Z3B3 1105 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 TSPAN33Q86UF1 283 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 CDKL3Q8IVW4 592 aaPredicted RBP19.23■□□□□ 0.67
RTN4-207ENST00000402434 SMIM14Q96QK8 99 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 KCNF1Q9H3M0 494 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 KLHL8Q9P2G9 620 aaPredicted RBP19.23■□□□□ 0.67
RTN4-207ENST00000402434 DNPEPQ9ULA0 475 aa19.23■□□□□ 0.67
RTN4-207ENST00000402434 TRIM23P36406 574 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 GRK6P43250 576 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 PTSQ03393 145 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 BNIP3Q12983 259 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 MTM1Q13496 603 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 PTK2BQ14289 1009 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 QPCTQ16769 361 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 HSD11B1LQ7Z5J1 315 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 TECPR1Q7Z6L1 1165 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 PARGQ86W56 976 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 GATAD2AQ86YP4 633 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 RAVER1Q8IY67 606 aaKnown RBP19.22■□□□□ 0.67
RTN4-207ENST00000402434 LPCAT1Q8NF37 534 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 BAHD1Q8TBE0 780 aaPredicted RBP19.22■□□□□ 0.67
RTN4-207ENST00000402434 SETD7Q8WTS6 366 aaKnown RBP19.22■□□□□ 0.67
RTN4-207ENST00000402434 FCRL5Q96RD9 977 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 FAM118BQ9BPY3 351 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 FERMT1Q9BQL6 677 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 CARD9Q9H257 536 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 C10orf88Q9H8K7 445 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 USP29Q9HBJ7 922 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 BTBD3Q9Y2F9 522 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 NCOR2Q9Y618 2525 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 TCRBV7S2A1N4TA0A589 114 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 ZNF189O75820 626 aaPredicted RBP19.22■□□□□ 0.67
RTN4-207ENST00000402434 CSF2P04141 144 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 NME1P15531 152 aaKnown RBP19.22■□□□□ 0.67
RTN4-207ENST00000402434 NFKB1P19838 968 aa19.22■□□□□ 0.67
RTN4-207ENST00000402434 THOP1P52888 689 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms