RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 SMOC2Q9H3U7 446 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 CCSER2Q9H7U1 834 aa16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 SPATS2LQ9NUQ6 558 aaKnown RBP16.02■□□□□ 0.16
CHRFAM7A-203ENST00000401522 OBSL1O75147 1896 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CCDC189A1A4V9 331 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NRG2O14511 850 aaPredicted RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 OLFM2O95897 454 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TBX18O95935 607 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 IGLV3-25P01717 112 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MPSTP25325 297 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ADSLP30566 484 aaPredicted RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ATP5C1P36542 298 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RPL26P61254 145 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 EIF4EBP2Q13542 120 aaPredicted RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 USP10Q14694 798 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PCID2Q5JVF3 399 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PKN3Q6P5Z2 889 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 C16orf89Q6UX73 402 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ACAD11Q709F0 780 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CNTN4Q8IWV2 1026 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CPSF7Q8N684 471 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ACVR1CQ8NER5 493 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DQX1Q8TE96 717 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CCDC124Q96CT7 223 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TCEAL4Q96EI5 215 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PPP1R2P1Q96PQ5 205 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 OR52B2Q96RD2 323 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CPSF2Q9P2I0 782 aaKnown RBP16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 NUDT5Q9UKK9 219 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SNX10Q9Y5X0 201 aa16.02■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DOCK6Q96HP0 2047 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ANAPC1Q9H1A4 1944 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RGSL1A5PLK6 1076 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 C2orf78A6NCI8 922 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 COCHO43405 550 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 F7P08709 466 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 UBTFL6P0CB48 400 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CCNCP24863 283 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DDX6P26196 483 aaKnown RBP eCLIP16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PIK3R1P27986 724 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GRIA4P48058 902 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ATAT1Q5SQI0 421 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 C10orf120Q5SQS8 335 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TXNDC8Q6A555 127 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CES5AQ6NT32 575 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TAC4Q86UU9 113 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 HPS6Q86YV9 775 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CCDC117Q8IWD4 279 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 STYXQ8WUJ0 223 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 LENG8Q96PV6 779 aaPredicted RBP16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SERPINI1Q99574 410 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TBL1YQ9BQ87 522 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 APOL5Q9BWW9 433 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RNF38Q9H0F5 515 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZMYM5Q9UJ78 669 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DNMT3LQ9UJW3 386 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 DENND4CQ5VZ89 1909 aa16.01■□□□□ 0.15
CHRFAM7A-203ENST00000401522 C2orf16Q68DN1 1984 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CASQ2O14958 399 aaPredicted RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PEX1O43933 1283 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ANXA9O76027 345 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CHRNGP07510 517 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GJA1P17302 382 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 HTR7P34969 479 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CYP4F8P98187 520 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 HERC3Q15034 1050 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RNF111Q6ZNA4 994 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 EP400NLQ6ZTU2 488 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 KBTBD6Q86V97 674 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TMEM151AQ8N4L1 468 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CNTD1Q8N815 330 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RP9Q8TA86 221 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PTCD2Q8WV60 388 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CELF6Q96J87 481 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SCYL1Q96KG9 808 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 GBP5Q96PP8 586 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 FCRL5Q96RD9 977 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 UBP1Q9NZI7 540 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SFMBT1Q9UHJ3 866 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ADAMTS6Q9UKP5 1117 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 MRPS23Q9Y3D9 190 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TK2O00142 265 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ZMPSTE24O75844 475 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SNUPNO95149 360 aaKnown RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 PIGNO95427 931 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC35E2BP0CK96 405 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 HDCP19113 662 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 EFEMP1Q12805 493 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TEAD2Q15562 447 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 CCDC85BQ15834 202 aaPredicted RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ARHGAP15Q53QZ3 475 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ARL13AQ5H913 290 aaPredicted RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 TCHHL1Q5QJ38 904 aaPredicted RBP16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RNF220Q5VTB9 566 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 OTOP3Q7RTS5 596 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 ATPAF2Q8N5M1 289 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SMRP1Q8NCR6 262 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 RNF34Q969K3 372 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SERPINB11Q96P15 392 aa16■□□□□ 0.15
CHRFAM7A-203ENST00000401522 SLC46A2Q9BY10 475 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms