RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 PRDM12Q9H4Q4 367 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 MYRFQ9Y2G1 1151 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 MAP4K5Q9Y4K4 846 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CACNB4O00305 520 aaPredicted RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 SLC9A3R1O14745 358 aaPredicted RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 KPNA5O15131 536 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 PRODHO43272 600 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 PAGE1O75459 146 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 ERBB2P04626 1255 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 H2AFXP16104 143 aaPredicted RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 TPP2P29144 1249 aaPredicted RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 IGFALSP35858 605 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 PPP2R2BQ00005 443 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 TRIM40Q6P9F5 258 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CMC1Q7Z7K0 106 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 TMPRSS6Q8IU80 811 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CAPSLQ8WWF8 208 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 SMG7Q92540 1137 aaKnown RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 IL22Q9GZX6 179 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 FOXO6A8MYZ6 492 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CFIP05156 583 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 PAEPP09466 180 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CDK16Q00536 496 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 NTRK3Q16288 839 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 C9orf64Q5T6V5 341 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 NAPRTQ6XQN6 538 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CFAP206Q8IYR0 622 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CERS2Q96G23 380 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 OR52E6Q96RD3 313 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 DDX3YO15523 660 aaKnown RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 TREHO43280 583 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 FGBP02675 491 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 FTH1P02794 183 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 CHRNGP07510 517 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 ANXA6P08133 673 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 WARSP23381 471 aaKnown RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 MASP1P48740 699 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 ZNF549Q6P9A3 640 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 ATG14Q6ZNE5 492 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 EEF1AKMT1Q8WVE0 214 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 COPS4Q9BT78 406 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 EBPLQ9BY08 206 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 TRMT13Q9NUP7 481 aaKnown RBP13.79□□□□□ -0.2
VAPA-202ENST00000400000 RRN3Q9NYV6 651 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 FBXW2Q9UKT8 454 aa13.79□□□□□ -0.2
VAPA-202ENST00000400000 A0A0A0MRY4 1105 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SAP18O00422 153 aaKnown RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 PRKCGP05129 697 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SMU1Q2TAY7 513 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 C8orf59Q8N0T1 100 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 STK40Q8N2I9 435 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SCLYQ96I15 445 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SPATA13Q96N96 652 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 CNPPD1Q9BV87 410 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 LRCH1Q9Y2L9 728 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 ULK1O75385 1050 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 BMP7P18075 431 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 CORO1AP31146 461 aaKnown RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 IRGCQ6NXR0 463 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 TSPAN14Q8NG11 270 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 EXOSC8Q96B26 276 aaKnown RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 SLC47A1Q96FL8 570 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 ALG2Q9H553 416 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 HPSEQ9Y251 543 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SIN3BO75182 1162 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 RYKP34925 604 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 CHST9Q7L1S5 443 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 TMPRSS9Q7Z410 1059 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 MAP4K3Q8IVH8 894 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 DTNBP1Q96EV8 351 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 MTF2Q9Y483 593 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 MAP2P11137 1827 aaKnown RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 APOC4-APOC2K7ER74 178 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 APOC2P02655 101 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 MT-ND1P03886 318 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 APODP05090 189 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 GIMD1P0DJR0 217 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 PCBP2Q15366 365 aaKnown RBP eCLIP13.78□□□□□ -0.2
VAPA-202ENST00000400000 ARMC3Q5W041 872 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 NAIF1Q69YI7 327 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 KRT74Q7RTS7 529 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 CLIP4Q8N3C7 705 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 OR52J3Q8NH60 311 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 ZNF483Q8TF39 744 aaPredicted RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 DNASE1L2Q92874 299 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 LPIN3Q9BQK8 851 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 GTPBP2Q9BX10 602 aaKnown RBP13.78□□□□□ -0.2
VAPA-202ENST00000400000 ABCB9Q9NP78 766 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SLC27A6Q9Y2P4 619 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 SLC34A1Q06495 639 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 TAF10Q12962 218 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 FAM91A1Q658Y4 838 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 GPRIN3Q6ZVF9 776 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 OR4L1Q8NH43 312 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 AUTS2Q8WXX7 1259 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 CEP295NLQ96MC4 621 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
VAPA-202ENST00000400000 ATAD3AQ9NVI7 634 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms