RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ATXN2Q99700 1313 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 AURKAO14965 403 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RAD51BO15315 384 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TMEM63AO94886 807 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SUN1O94901 812 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PCDH8O95206 1070 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 C1SP09871 688 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 C6P13671 934 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 HLA-DPA1P20036 260 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ITPKAP23677 461 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 EPHB1P54762 984 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DR1Q01658 176 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CKAP4Q07065 602 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CCDC15Q0P6D6 951 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GPS1Q13098 491 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LRRC66Q68CR7 880 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 KIAA1161Q6NSJ0 714 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ERAP2Q6P179 960 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 C4orf22Q6V702 233 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 KDM7AQ6ZMT4 941 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 USP45Q70EL2 814 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LYSMD3Q7Z3D4 306 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 HSD11B1LQ7Z5J1 315 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TTC30BQ8N4P2 665 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SLC25A41Q8N5S1 370 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GRK7Q8WTQ7 553 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CPT1BQ92523 772 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RMDN1Q96DB5 314 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 COQ10AQ96MF6 247 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PPP1R2P1Q96PQ5 205 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 KLF6Q99612 283 aaPredicted RBP12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FSD1LQ9BXM9 530 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ADGRE3Q9BY15 652 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LRRC40Q9H9A6 602 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 EIF2B3Q9NR50 452 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TMEM74BQ9NUR3 256 aa12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PIH1D1Q9NWS0 290 aaKnown RBP12.44□□□□□ -0.42
HLA-DQB1-203ENST00000399082 A0A1W2PPC4 97 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NEMP1O14524 444 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TP73O15350 636 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RAD51CO43502 376 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 EPN2O95208 641 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CLDN7O95471 211 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GAS8O95995 478 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FGF1P05230 155 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 APRTP07741 180 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ACTN2P35609 894 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DHPSP49366 369 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 STC1P52823 247 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RPS21P63220 83 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 BASP1P80723 227 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NHLH1Q02575 133 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CREB5Q02930 508 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PTSQ03393 145 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TUBB2AQ13885 445 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 DHX34Q14147 1143 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ELF2Q15723 593 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PEAR1Q5VY43 1037 aaPredicted RBP12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LYSMD4Q5XG99 296 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MICALCLQ6ZW33 695 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TECPR1Q7Z6L1 1165 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PELI3Q8N2H9 469 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PAF1Q8N7H5 531 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 NOA1Q8NC60 698 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 LRRN4CLQ8ND94 238 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 OR52K1Q8NGK4 314 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CXorf40AQ8TE69 158 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FOXJ1Q92949 421 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TUBB2BQ9BVA1 445 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 L2HGDHQ9H9P8 463 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MAGEE1Q9HCI5 957 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FZD3Q9NPG1 666 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CASS4Q9NQ75 786 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 EIF2B4Q9UI10 523 aaKnown RBP12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SHOC2Q9UQ13 582 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CA5BQ9Y2D0 317 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ZNF711Q9Y462 761 aa12.43□□□□□ -0.42
HLA-DQB1-203ENST00000399082 FRYLO94915 3013 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 OTOGLQ3ZCN5 2332 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 C1orf232A0A0U1RR37 186 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 GOLGA8CPA6NN73 597 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ERI2A8K979 691 aaKnown RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 MEI4A8MW99 385 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PROB1E7EW31 1015 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 SLC31A1O15431 190 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PSMD3O43242 534 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RECQL5O94762 991 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RHOBTB1O94844 696 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PAK4O96013 591 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 ELFN1P0C7U0 828 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CYP2A6P11509 494 aaPredicted RBP12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TPSB2P20231 275 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 CD27P26842 260 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 IGFALSP35858 605 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TERF1P54274 439 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 AGERQ15109 404 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 PPP1R7Q15435 360 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 TPSAB1Q15661 275 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 WSCD2Q2TBF2 565 aa12.42□□□□□ -0.42
HLA-DQB1-203ENST00000399082 RNASEH2BQ5TBB1 312 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms