RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 H0Y858 1186 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 NEMP1O14524 444 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 STX7O15400 261 aaKnown RBP14.26□□□□□ -0.13
SKA1-202ENST00000398452 FZD6O60353 706 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 USP1O94782 785 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 TRBC1P01850 177 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 SLC4A1P02730 911 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 DNTTP04053 509 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 ABHD2P08910 425 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 ACADMP11310 421 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 CTPS1P17812 591 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 CD72P21854 359 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 ITGB7P26010 798 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 ABL2P42684 1182 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 SUOXP51687 545 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 EIF3BP55884 814 aaKnown RBP14.26□□□□□ -0.13
SKA1-202ENST00000398452 FAM193AP78312 1265 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 PRAMEP78395 509 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 ELP6Q0PNE2 266 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 TCF15Q12870 199 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 CBLBQ13191 982 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 ENPP2Q13822 863 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 SLC29A2Q14542 456 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 TAF1AQ15573 450 aaPredicted RBP14.26□□□□□ -0.13
SKA1-202ENST00000398452 KLHL38Q2WGJ6 581 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 TTC31Q49AM3 519 aaPredicted RBP14.26□□□□□ -0.13
SKA1-202ENST00000398452 ALS2CLQ60I27 953 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 DENND5AQ6IQ26 1287 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 MMAAQ8IVH4 418 aaKnown RBP14.26□□□□□ -0.13
SKA1-202ENST00000398452 SIX5Q8N196 739 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 MPP5Q8N3R9 675 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 IL17RCQ8NAC3 791 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 OR2T3Q8NH03 318 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 GANCQ8TET4 914 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 ECHDC3Q96DC8 303 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 GABRG3Q99928 467 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 KIFC1Q9BW19 673 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 MAGEE1Q9HCI5 957 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 POLMQ9NP87 494 aaPredicted RBP14.26□□□□□ -0.13
SKA1-202ENST00000398452 TXNDC16Q9P2K2 825 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 PPM1HQ9ULR3 514 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 COL4A3Q01955 1670 aa14.26□□□□□ -0.13
SKA1-202ENST00000398452 C1orf232A0A0U1RR37 186 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 EXOC1LA0A1B0GW35 172 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 CAPN8A6NHC0 703 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 C16orf96A6NNT2 1141 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 ATP8B1O43520 1251 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 PRLP01236 227 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 PIRTP0C851 137 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 LPOP22079 712 aaPredicted RBP14.25□□□□□ -0.13
SKA1-202ENST00000398452 SSTR1P30872 391 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 SLC8A1P32418 973 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 HADHAP40939 763 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 NEK3P51956 506 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 CAMK2GQ13555 558 aaPredicted RBP14.25□□□□□ -0.13
SKA1-202ENST00000398452 THOC5Q13769 683 aaKnown RBP14.25□□□□□ -0.13
SKA1-202ENST00000398452 CCINQ13939 588 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 STAT4Q14765 748 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 UGP2Q16851 508 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 POM121L1PQ3SYA9 428 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 TSTD2Q5T7W7 516 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 UNC5AQ6ZN44 842 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 OTUD6BQ8N6M0 293 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 UHMK1Q8TAS1 419 aaKnown RBP14.25□□□□□ -0.13
SKA1-202ENST00000398452 STYXQ8WUJ0 223 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 PIH1D2Q8WWB5 315 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 ATOH1Q92858 354 aaPredicted RBP14.25□□□□□ -0.13
SKA1-202ENST00000398452 PEX13Q92968 403 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 CYTH2Q99418 400 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 OMDQ99983 421 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 TXLNGYQ9BZA5 131 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 LMAN1LQ9HAT1 526 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 ZFYVE1Q9HBF4 777 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 LRRC4CQ9HCJ2 640 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 LTB4R2Q9NPC1 389 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 CHRAC1Q9NRG0 131 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 SCML1Q9UN30 329 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 PLAAQ9Y263 795 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 NCKAP1Q9Y2A7 1128 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 ZNF711Q9Y462 761 aa14.25□□□□□ -0.13
SKA1-202ENST00000398452 TSPAN11A1L157 253 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 CCDC78A2IDD5 438 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 FAM170BA6NMN3 283 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 PAPSS2O95340 614 aaPredicted RBP14.24□□□□□ -0.13
SKA1-202ENST00000398452 CTSLP07711 333 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 C5AR1P21730 350 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 STARD6P59095 220 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 SATB1Q01826 763 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 IHHQ14623 411 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 CRYMQ14894 314 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 CST6Q15828 149 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 LONRF1Q17RB8 773 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 ANKRD20A4Q4UJ75 823 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 CTAGE3PQ8IX95 158 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 PGBD3Q8N328 593 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 TMEM105Q8N8V8 129 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 CALML6Q8TD86 181 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 EZH1Q92800 747 aaPredicted RBP14.24□□□□□ -0.13
SKA1-202ENST00000398452 RAB7BQ96AH8 199 aa14.24□□□□□ -0.13
SKA1-202ENST00000398452 SCRN2Q96FV2 425 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms