RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZNF37AP17032 561 aaPredicted RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 CYP4F3Q08477 520 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 JOSD2Q8TAC2 188 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZNF671Q8TAW3 534 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 TOR4AQ9NXH8 423 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 A0A1W2PRU2 124 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 SLC28A2O43868 658 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 IGFALSP35858 605 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 WDR93Q6P2C0 686 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 EIF3MQ7L2H7 374 aaKnown RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 LDB1Q86U70 411 aaPredicted RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 PNPT1Q8TCS8 783 aaKnown RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 RXFP1Q9HBX9 757 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 CTSOP43234 321 aaPredicted RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 GRM3Q14832 879 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 MYLK2Q9H1R3 596 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ANKZF1Q9H8Y5 726 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 CCNDBP1O95273 360 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 PROCP04070 461 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZCWPW2Q504Y3 356 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 GPRIN3Q6ZVF9 776 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZDHHC13Q8IUH4 622 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 FAM98AQ8NCA5 519 aaKnown RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 IL12RB2Q99665 862 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 POLMQ9NP87 494 aaPredicted RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 INTS7Q9NVH2 962 aaKnown RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 PACSIN3Q9UKS6 424 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 RAI2Q9Y5P3 530 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 OTCP00480 354 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 PRKAA2P54646 552 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 SMARCB1Q12824 385 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 NEDD8Q15843 81 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 HDDC2Q7Z4H3 204 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 MCEMP1Q8IX19 187 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 TLR10Q9BXR5 811 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 DERAQ9Y315 318 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 MBTD1Q05BQ5 628 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZCCHC10Q8TBK6 192 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZNF398Q8TD17 642 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 OSBPL2Q9H1P3 480 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 VAV3Q9UKW4 847 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 PAIP2BQ9ULR5 123 aaKnown RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 FGF1P05230 155 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 MRPS22P82650 360 aaKnown RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 MAPKAPK3Q16644 382 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 KLHL12Q53G59 568 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 PDZK1Q5T2W1 519 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 BHLHB9Q6PI77 547 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 AP4S1Q9Y587 144 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ADGRA3Q8IWK6 1321 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 AP5Z1O43299 807 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 SHBGP04278 402 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ANXA6P08133 673 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZNF549Q6P9A3 640 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 CYB5D1Q6P9G0 228 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 KREMEN2Q8NCW0 462 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 SLC38A3Q99624 504 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 COLEC10Q9Y6Z7 277 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 LRRC72A6NJI9 287 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 KYAT3Q6YP21 454 aaKnown RBP11.37□□□□□ -0.59
TTC28-201ENST00000397906 ADAMTSL2Q86TH1 951 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 GDPD5Q8WTR4 605 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 AP2M1Q96CW1 435 aa11.37□□□□□ -0.59
TTC28-201ENST00000397906 ZNF536O15090 1300 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 hCG_1818297A0A087WSY0 165 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CA12O43570 354 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CDK14O94921 469 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 ST13P50502 369 aaKnown RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 WNT3AP56704 352 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PCDHA2Q9Y5H9 948 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 EPHB6O15197 1021 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 TACR2P21452 398 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PLEKHA7Q6IQ23 1121 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 TAPT1Q6NXT6 567 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 KLHL24Q6TFL4 600 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 VSTM1Q6UX27 236 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 ZNF248Q8NDW4 579 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 OR4K2Q8NGD2 314 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 SHC3Q92529 594 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 P2RY11Q96G91 374 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 MFSD14AQ96MC6 490 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 TMEM51Q9NW97 253 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 MRPS17Q9Y2R5 130 aaKnown RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 KCNE2Q9Y6J6 123 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 FAM237BA0A1B0GVD1 139 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 SOWAHBA6NEL2 793 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 CCL22O00626 93 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 ITGAXP20702 1163 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 UAP1L1Q3KQV9 507 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 BRMS1LQ5PSV4 323 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 PTPN18Q99952 460 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 COL20A1Q9P218 1284 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 TEX28O15482 410 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 IDSP22304 550 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 RXRGP48443 463 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 RTP1P59025 263 aa11.36□□□□□ -0.59
TTC28-201ENST00000397906 NRG1Q02297 640 aaPredicted RBP11.36□□□□□ -0.59
TTC28-201ENST00000397906 HMCESQ96FZ2 354 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms