RNA–Protein interactions for RNA: ENST00000397643.3

CUX2-202, Transcript of cut like homeobox 2, humanhuman

TSL 1 (best)

Gene CUX2, Length 890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-202ENST00000397643 B4DGG1 531 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 B4GAT1O43505 415 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 NUDT21O43809 227 aaKnown RBP16.19■□□□□ 0.18
CUX2-202ENST00000397643 MMEP08473 750 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 CYTH1Q15438 398 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 EFHC2Q5JST6 749 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 KLHDC7AQ5VTJ3 777 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 SPECC1LQ69YQ0 1117 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 CLEC18BQ6UXF7 455 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 TAF8Q7Z7C8 310 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 C17orf82Q86X59 251 aaPredicted RBP16.19■□□□□ 0.18
CUX2-202ENST00000397643 CLEC18CQ8NCF0 446 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 FAM46DQ8NEK8 389 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 OR56A4Q8NGH8 313 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 ATL2Q8NHH9 583 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 CCL4L1Q8NHW4 92 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 JOSD2Q8TAC2 188 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 ZNF564Q8TBZ8 553 aaPredicted RBP16.19■□□□□ 0.18
CUX2-202ENST00000397643 HCAR2Q8TDS4 363 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 EPS8L1Q8TE68 723 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 JPH3Q8WXH2 748 aaPredicted RBP16.19■□□□□ 0.18
CUX2-202ENST00000397643 NAA15Q9BXJ9 866 aaKnown RBP16.19■□□□□ 0.18
CUX2-202ENST00000397643 TMEM168Q9H0V1 697 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 SUV39H2Q9H5I1 410 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 GRPEL1Q9HAV7 217 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 RDH14Q9HBH5 336 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 DAAM1Q9Y4D1 1078 aa16.19■□□□□ 0.18
CUX2-202ENST00000397643 STMND1H3BQB6 276 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 PRKCGP05129 697 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 GM2AP17900 193 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 XPAP23025 273 aaPredicted RBP16.18■□□□□ 0.18
CUX2-202ENST00000397643 SDC4P31431 198 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 PTPN9P43378 593 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 RALGDSQ12967 914 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 RAPGEF1Q13905 1077 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 UBAP2LQ14157 1087 aaKnown RBP16.18■□□□□ 0.18
CUX2-202ENST00000397643 GSE1Q14687 1217 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 MAP9Q49MG5 647 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 STRADAQ7RTN6 431 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 ZNF438Q7Z4V0 828 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 PTRH1Q86Y79 214 aaKnown RBP16.18■□□□□ 0.18
CUX2-202ENST00000397643 PYROXD2Q8N2H3 581 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 RTL3Q8N8U3 475 aaKnown RBP16.18■□□□□ 0.18
CUX2-202ENST00000397643 NKD1Q969G9 470 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 NTAN1Q96AB6 310 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 NUDT22Q9BRQ3 303 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 FAM207AQ9NSI2 230 aaPredicted RBP16.18■□□□□ 0.18
CUX2-202ENST00000397643 ATP8A1Q9Y2Q0 1164 aa16.18■□□□□ 0.18
CUX2-202ENST00000397643 TNFRSF10CO14798 259 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 BUB1BO60566 1050 aaPredicted RBP16.17■□□□□ 0.18
CUX2-202ENST00000397643 CPNE6O95741 557 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 MMP8P22894 467 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 PBX1P40424 430 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 KLK7P49862 253 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 ZNF75DP51815 510 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 MAZP56270 477 aaKnown RBP16.17■□□□□ 0.18
CUX2-202ENST00000397643 POLE2P56282 527 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 SERINC3Q13530 473 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 ARHGEF7Q14155 803 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 NR1D2Q14995 579 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 SKIDA1Q1XH10 827 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 BORAQ6PGQ7 559 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 PHLDB2Q86SQ0 1253 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 ZNF354CQ86Y25 554 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 DNAAF5Q86Y56 855 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 PELI3Q8N2H9 469 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 MSANTD4Q8NCY6 345 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 RCBTB1Q8NDN9 531 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 NCAPGQ9BPX3 1015 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 LGR4Q9BXB1 951 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 DPEP2Q9H4A9 486 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 PDFQ9HBH1 243 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 PCDHGA3Q9Y5H0 932 aa16.17■□□□□ 0.18
CUX2-202ENST00000397643 NOTCH2Q04721 2471 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 CFAP69A5D8W1 941 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 RASA4BC9J798 803 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 F8VZ95 297 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 CACNB4O00305 520 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 HGSO14964 777 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 RASA4O43374 803 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 RECQL5O94762 991 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 NTRK1P04629 796 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 CYP1A1P04798 512 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 HOXC4P09017 264 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 FGF3P11487 239 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 LIFP15018 202 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 UCHL3P15374 230 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 TRIM23P36406 574 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 RGRP47804 291 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 OR1D5P58170 312 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 YBEYP58557 167 aaPredicted RBP16.16■□□□□ 0.18
CUX2-202ENST00000397643 FOXK1P85037 733 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 KCNAB2Q13303 367 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 TMEM164Q5U3C3 297 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 ERAP2Q6P179 960 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 BRAT1Q6PJG6 821 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 PIM3Q86V86 326 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 NRROSQ86YC3 692 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 CAMK1DQ8IU85 385 aa16.16■□□□□ 0.18
CUX2-202ENST00000397643 FAM172AQ8WUF8 416 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms