RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PEX5P50542 639 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 SLC10A2Q12908 348 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 WSCD2Q2TBF2 565 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 ARMC12Q5T9G4 340 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 ALG1LQ6GMV1 187 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 LIPIQ6XZB0 460 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 ZNF572Q7Z3I7 529 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 NT5DC3Q86UY8 548 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CCDC13Q8IYE1 715 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 NDUFAF2Q8N183 169 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PNPLA1Q8N8W4 532 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PDCD6IPQ8WUM4 868 aaKnown RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 BTN2A2Q8WVV5 523 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 NSMCE3Q96MG7 304 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CNTNAP3BQ96NU0 1288 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 SEMA3CQ99985 751 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 CNTNAP3Q9BZ76 1288 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 GOLPH3Q9H4A6 298 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 MBNL1Q9NR56 388 aaKnown RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 RBM22Q9NW64 420 aaKnown RBP eCLIP14.63□□□□□ -0.077e-11■■■■■ 30.5
SEC13-208ENST00000397109 ARGLU1Q9NWB6 273 aaPredicted RBP14.63□□□□□ -0.07
SEC13-208ENST00000397109 TOR4AQ9NXH8 423 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 KCTD5Q9NXV2 234 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 COQ6Q9Y2Z9 468 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 HYOU1Q9Y4L1 999 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 PCDHGA1Q9Y5H4 931 aa14.63□□□□□ -0.07
SEC13-208ENST00000397109 LRRK1Q38SD2 2015 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 FAM221BA6H8Z2 402 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 GOLGA8CPA6NN73 597 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 SDC3O75056 442 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 PGLSO95336 258 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 MAP3K6O95382 1288 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 TOP3BO95985 862 aaKnown RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 ATP1A1P05023 1023 aaKnown RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 PRKCGP05129 697 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 ALPPL2P10696 532 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 CYP2A6P11509 494 aaPredicted RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 NME1P15531 152 aaKnown RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 CA4P22748 312 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 PPIDQ08752 370 aaKnown RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 RALGDSQ12967 914 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 ZNF211Q13398 564 aaPredicted RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 PDK1Q15118 436 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 IRF4Q15306 451 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 BZW1Q7L1Q6 419 aaKnown RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 RFX6Q8HWS3 928 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 SLC25A45Q8N413 288 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 PLD5Q8N7P1 536 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 RNF25Q96BH1 459 aaPredicted RBP14.62□□□□□ -0.07
SEC13-208ENST00000397109 BRD8Q9H0E9 1235 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.62□□□□□ -0.07
SEC13-208ENST00000397109 MSRB2Q9Y3D2 182 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 HEY1Q9Y5J3 304 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 CSNK1G3Q9Y6M4 447 aa14.62□□□□□ -0.07
SEC13-208ENST00000397109 PPP1R12AO14974 1030 aaPredicted RBP14.61□□□□□ -0.07
SEC13-208ENST00000397109 RECQL5O94762 991 aaPredicted RBP14.61□□□□□ -0.07
SEC13-208ENST00000397109 SPINK2P20155 84 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 VIPR1P32241 457 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 CTNNA1P35221 906 aaKnown RBP14.61□□□□□ -0.07
SEC13-208ENST00000397109 TRAF2Q12933 501 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 MTM1Q13496 603 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 TFDP2Q14188 446 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 ERCC6LQ2NKX8 1250 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 MFSD7Q6UXD7 560 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 MACC1Q6ZN28 852 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 USP45Q70EL2 814 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 GALNT15Q8N3T1 639 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 OR4C6Q8NH72 309 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 ATL2Q8NHH9 583 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 SCRN2Q96FV2 425 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 TBATAQ96M53 351 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 DUSP23Q9BVJ7 150 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 B4GALT6Q9UBX8 382 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 PPIL1Q9Y3C6 166 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 RAI2Q9Y5P3 530 aa14.61□□□□□ -0.07
SEC13-208ENST00000397109 CCDC66A2RUB6 948 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 MIF4GDA9UHW6 222 aaKnown RBP14.6□□□□□ -0.07
SEC13-208ENST00000397109 SCAMP1O15126 338 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 ZRANB2O95218 330 aaKnown RBP eCLIP14.6□□□□□ -0.07
SEC13-208ENST00000397109 JUNDP17535 347 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 CKMT2P17540 419 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 CTNNA2P26232 953 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 HTR1BP28222 390 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 NR2C2P49116 596 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 BLKP51451 505 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 IFI35P80217 286 aaPredicted RBP14.6□□□□□ -0.07
SEC13-208ENST00000397109 SEMG2Q02383 582 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 EIF2B5Q13144 721 aaKnown RBP14.6□□□□□ -0.07
SEC13-208ENST00000397109 ILKQ13418 452 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 INPP5AQ14642 412 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 TAZQ16635 292 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 ZNF542PQ5EBM4 170 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 MEI1Q5TIA1 1274 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 PEX26Q7Z412 305 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 RCOR2Q8IZ40 523 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 HES6Q96HZ4 224 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 LGMNQ99538 433 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 APOOQ9BUR5 198 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 EVA1BQ9NVM1 165 aa14.6□□□□□ -0.07
SEC13-208ENST00000397109 UCKL1Q9NWZ5 548 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms