RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 PROB1E7EW31 1015 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 TM7SF2O76062 418 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 FSBPO95073 299 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 EPN2O95208 641 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 AGTP01019 485 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 C6P13671 934 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 LHCGRP22888 699 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 CD27P26842 260 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 HOXD12P35452 270 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 PTGER3P43115 390 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 CHRNA4P43681 627 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 LMAN1P49257 510 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 DHPSP49366 369 aaPredicted RBP16.46■□□□□ 0.23
AP1S3-202ENST00000396653 LIG3P49916 1009 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 CREB5Q02930 508 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 TRIP13Q15645 432 aaPredicted RBP16.46■□□□□ 0.23
AP1S3-202ENST00000396653 CDKN3Q16667 212 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 PEAR1Q5VY43 1037 aaPredicted RBP16.46■□□□□ 0.23
AP1S3-202ENST00000396653 SEL1L3Q68CR1 1132 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 LAIR1Q6GTX8 287 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 CRTC1Q6UUV9 634 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 KDELC2Q7Z4H8 507 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 MAATS1Q7Z4T9 603 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 CBARPQ8N350 705 aaPredicted RBP16.46■□□□□ 0.23
AP1S3-202ENST00000396653 TAB3Q8N5C8 712 aaPredicted RBP16.46■□□□□ 0.23
AP1S3-202ENST00000396653 SUMF1Q8NBK3 374 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 ORAI3Q9BRQ5 295 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 WRAP53Q9BUR4 548 aaKnown RBP16.46■□□□□ 0.23
AP1S3-202ENST00000396653 C1QTNF7Q9BXJ2 289 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 PCDHGA5Q9Y5G8 931 aa16.46■□□□□ 0.23
AP1S3-202ENST00000396653 FAM187AA6NFU0 413 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 MMP20O60882 483 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 APRTP07741 180 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 VPS41P49754 854 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 STC1P52823 247 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 KCNJ11Q14654 390 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 LRRC66Q68CR7 880 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 DENND5AQ6IQ26 1287 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 CYP2U1Q7Z449 544 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 SLC25A41Q8N5S1 370 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 CEP112Q8N8E3 955 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 LENG8Q96PV6 779 aaPredicted RBP16.45■□□□□ 0.22
AP1S3-202ENST00000396653 SLC17A9Q9BYT1 436 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 FAM86C1Q9NVL1 165 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 SUSD2Q9UGT4 822 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 ASIC3Q9UHC3 531 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 ZNF711Q9Y462 761 aa16.45■□□□□ 0.22
AP1S3-202ENST00000396653 C1orf232A0A0U1RR37 186 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 CTAGE15A4D2H0 777 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 IGLON5A6NGN9 336 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 AP3B1O00203 1094 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 TTI1O43156 1089 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 USP12O75317 370 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 CTAGE8P0CG41 777 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 HNRNPA2B1P22626 353 aaKnown RBP16.44■□□□□ 0.22
AP1S3-202ENST00000396653 MAT2AP31153 395 aaKnown RBP16.44■□□□□ 0.22
AP1S3-202ENST00000396653 CDH17Q12864 832 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 SGCGQ13326 291 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 OLIG2Q13516 323 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 FGL2Q14314 439 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 SPARCL1Q14515 664 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 ARMCX6Q7L4S7 300 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 PCGF5Q86SE9 256 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 TSPAN33Q86UF1 283 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 CTAGE6Q86UF2 777 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 CTAGE4Q8IX94 777 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 SNX19Q92543 992 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 COQ10AQ96MF6 247 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 SMIM14Q96QK8 99 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 C19orf43Q9BQ61 176 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 APOL2Q9BQE5 337 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 EBF2Q9HAK2 575 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 ZFYVE1Q9HBF4 777 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 CASS4Q9NQ75 786 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 EIF2B4Q9UI10 523 aaKnown RBP16.44■□□□□ 0.22
AP1S3-202ENST00000396653 RALGAPA1Q6GYQ0 2036 aa16.44■□□□□ 0.22
AP1S3-202ENST00000396653 PI4KAP42356 2102 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 RGSL1A5PLK6 1076 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 PRAMEF26H0Y7S4 382 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 DNALI1O14645 258 aaPredicted RBP16.43■□□□□ 0.22
AP1S3-202ENST00000396653 NDC80O14777 642 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 LZTS3O60299 673 aaPredicted RBP16.43■□□□□ 0.22
AP1S3-202ENST00000396653 LMNAP02545 664 aaKnown RBP16.43■□□□□ 0.22
AP1S3-202ENST00000396653 C1SP09871 688 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 GM2AP17900 193 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 ITPKAP23677 461 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 AKT2P31751 481 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 SEMG2Q02383 582 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 NHLH1Q02575 133 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 MSLNQ13421 630 aaPredicted RBP16.43■□□□□ 0.22
AP1S3-202ENST00000396653 PTPRRQ15256 657 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 PPP1R21Q6ZMI0 780 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 LYSMD3Q7Z3D4 306 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 TMC3Q7Z5M5 1100 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 RABEPKQ7Z6M1 372 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 SYT12Q8IV01 421 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 RGL4Q8IZJ4 473 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 TMEM145Q8NBT3 493 aa16.43■□□□□ 0.22
AP1S3-202ENST00000396653 C1orf216Q8TAB5 229 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms