RNA–Protein interactions for RNA: ENST00000396545.4

TNFSF13-205, Transcript of TNF superfamily member 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TNFSF13, Length 1,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-205ENST00000396545 LRRN4Q8WUT4 740 aa17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 HDAC11Q96DB2 347 aa17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 LMLNQ96KR4 655 aa17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 PRICKLE1Q96MT3 831 aaPredicted RBP17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 SPATA13Q96N96 652 aa17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 DHRS4Q9BTZ2 278 aa17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 ACSS3Q9H6R3 686 aa17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 TM7SF3Q9NS93 570 aa17.63■□□□□ 0.41
TNFSF13-205ENST00000396545 A0A1B0GVT2 93 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 SPAG6O75602 509 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 SSTR1P30872 391 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 FDFT1P37268 417 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 CSNK1EP49674 416 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 GALNT2Q10471 571 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ANKRD20A2Q5SQ80 823 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 FAXCQ5TGI0 409 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ANKRD20A1Q5TYW2 823 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ANKRD20A3Q5VUR7 823 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 NADSYN1Q6IA69 706 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 DBX2Q6ZNG2 339 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 CAND1Q86VP6 1230 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ZNF683Q8IZ20 524 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 AGGF1Q8N302 714 aaeCLIP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ZNF557Q8N988 423 aaPredicted RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 SNX19Q92543 992 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 LRRC39Q96DD0 335 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 LGMNQ99538 433 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 PRMT1Q99873 361 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ZYG11BQ9C0D3 744 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 CCDC134Q9H6E4 229 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 NEU3Q9UQ49 428 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 PCDHGB2Q9Y5G2 931 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 GMNCA6NCL1 334 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 DRGXA6NNA5 263 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 SEMA4FO95754 770 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 POLR2EP19388 210 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ELK3P41970 407 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 PPIDQ08752 370 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 KLHL38Q2WGJ6 581 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 C5orf22Q49AR2 442 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 C3orf62Q6ZUJ4 267 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 ZNF534Q76KX8 674 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 SLCO6A1Q86UG4 719 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 NLRP14Q86W24 1093 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 IGDCC3Q8IVU1 814 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 MFN1Q8IWA4 741 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 PALM2Q8IXS6 379 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 HJURPQ8NCD3 748 aaPredicted RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 FIBINQ8TAL6 211 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 SETD7Q8WTS6 366 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 MYO19Q96H55 970 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 VAT1Q99536 393 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 BTBD1Q9H0C5 482 aa17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 APOBEC2Q9Y235 224 aaKnown RBP17.62■□□□□ 0.41
TNFSF13-205ENST00000396545 TAF4O00268 1085 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 FAM107AO95990 144 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 DNTTP04053 509 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 APRTP07741 180 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 NDST2P52849 883 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 SEC24CP53992 1094 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 GEMIN4P57678 1058 aaKnown RBP17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 CDK16Q00536 496 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 KIF19Q2TAC6 998 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 ZNF776Q68DI1 518 aaPredicted RBP17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 FOXR1Q6PIV2 292 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 ARHGEF18Q6ZSZ5 1173 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 TRABD2AQ86V40 505 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 FBF1Q8TES7 1133 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 TTC17Q96AE7 1141 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 BIRC7Q96CA5 298 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 MYEOVQ96EZ4 313 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 TSGA13Q96PP4 275 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 RSPH9Q9H1X1 276 aaPredicted RBP17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 TM9SF3Q9HD45 589 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 EIF2B3Q9NR50 452 aaKnown RBP17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 INTS9Q9NV88 658 aaKnown RBP17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 TMEM248Q9NWD8 314 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 SUN2Q9UH99 717 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 CHMP2BQ9UQN3 213 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 SNX10Q9Y5X0 201 aa17.61■□□□□ 0.41
TNFSF13-205ENST00000396545 APC2O95996 2303 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 F5H5T6 163 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 POC1B-GALNT4F8VUJ3 575 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 RNF103O00237 685 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 NDUFAB1O14561 156 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 FLRT2O43155 660 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 GSTA2P09210 222 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 CREB1P16220 341 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 GARSP41250 739 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 GRIA4P48058 902 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 MAPKAPK2P49137 400 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 RPS24P62847 133 aaKnown RBP17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 WASHC5Q12768 1159 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 TMED2Q15363 201 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 TTC31Q49AM3 519 aaPredicted RBP17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 ARTNQ5T4W7 220 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 CAPN12Q6ZSI9 719 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 CHSY1Q86X52 802 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 PROSER1Q86XN7 944 aa17.6■□□□□ 0.41
TNFSF13-205ENST00000396545 UMODL1-AS1Q8N2C9 162 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms