RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 ZNF366Q8N895 744 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 ATXN2LQ8WWM7 1075 aaKnown RBP13.73□□□□□ -0.21
VAPB-202ENST00000395802 MCCC1Q96RQ3 725 aaPredicted RBP13.73□□□□□ -0.21
VAPB-202ENST00000395802 GABRG3Q99928 467 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 FAM167BQ9BTA0 163 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 PRSS16Q9NQE7 514 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 C20orf96Q9NUD7 363 aaPredicted RBP13.73□□□□□ -0.21
VAPB-202ENST00000395802 F5P12259 2224 aa13.73□□□□□ -0.21
VAPB-202ENST00000395802 FAM159BA6NKW6 160 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 HMGB1P1B2RPK0 211 aaPredicted RBP13.72□□□□□ -0.21
VAPB-202ENST00000395802 KPNA3O00505 521 aaPredicted RBP13.72□□□□□ -0.21
VAPB-202ENST00000395802 PFDN6O15212 129 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 SLC7A4O43246 635 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 ADH1BP00325 375 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 EGFP01133 1207 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 IL1BP01584 269 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 NMBRP28336 390 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 ABL2P42684 1182 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 GYS2P54840 703 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 ELP6Q0PNE2 266 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 CAMK2GQ13555 558 aaPredicted RBP13.72□□□□□ -0.21
VAPB-202ENST00000395802 ARHGEF7Q14155 803 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 CNGA3Q16281 694 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 C2orf27AQ580R0 203 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 EOGTQ5NDL2 527 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 KCTD16Q68DU8 428 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 TTC7BQ86TV6 843 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 KCNMB4Q86W47 210 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 SLC26A11Q86WA9 606 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 RAVER1Q8IY67 606 aaKnown RBP13.72□□□□□ -0.21
VAPB-202ENST00000395802 PIP4K2CQ8TBX8 421 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 EPS8L3Q8TE67 593 aaKnown RBP13.72□□□□□ -0.21
VAPB-202ENST00000395802 SCG3Q8WXD2 468 aaKnown RBP13.72□□□□□ -0.21
VAPB-202ENST00000395802 RAB7BQ96AH8 199 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 PGM2Q96G03 612 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 NELL2Q99435 816 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 PSMC3IPQ9P2W1 217 aaPredicted RBP13.72□□□□□ -0.21
VAPB-202ENST00000395802 ZNF711Q9Y462 761 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 ANKRD36A6QL64 1941 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 MYO10Q9HD67 2058 aa13.72□□□□□ -0.21
VAPB-202ENST00000395802 C1orf232A0A0U1RR37 186 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 TLDC2A0PJX2 215 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 C16orf96A6NNT2 1141 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 UPK3BL1B0FP48 263 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 UPK3BL2E5RIL1 263 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 POC1B-GALNT4F8VUJ3 575 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 RGS16O15492 202 aaPredicted RBP13.71□□□□□ -0.21
VAPB-202ENST00000395802 VAPBO95292 243 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 CTSLP07711 333 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 CNTFP26441 200 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 HNF1BP35680 557 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 SERPINB9P50453 376 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 PTPN5P54829 565 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 ACVR1Q04771 509 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 LRRC32Q14392 662 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 AGBL2Q5U5Z8 902 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 ESRP1Q6NXG1 681 aaKnown RBP13.71□□□□□ -0.21
VAPB-202ENST00000395802 FBXL19Q6PCT2 694 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 RASSF3Q86WH2 238 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 FCRL3Q96P31 734 aaPredicted RBP13.71□□□□□ -0.21
VAPB-202ENST00000395802 RSPH9Q9H1X1 276 aaPredicted RBP13.71□□□□□ -0.21
VAPB-202ENST00000395802 CENPHQ9H3R5 247 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 ARHGEF3Q9NR81 526 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 RAD18Q9NS91 495 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 NLE1Q9NVX2 485 aaPredicted RBP13.71□□□□□ -0.21
VAPB-202ENST00000395802 ZNF180Q9UJW8 692 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 FBXL21Q9UKT6 434 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 SCML1Q9UN30 329 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 ARL5AQ9Y689 179 aa13.71□□□□□ -0.21
VAPB-202ENST00000395802 IQANK1A0A1B0GTG1 560 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 C19orf67A6NJJ6 358 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 RPP40O75818 363 aaKnown RBP13.71□□□□□ -0.22
VAPB-202ENST00000395802 KRT37O76014 449 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 KRT38O76015 456 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 CTPS1P17812 591 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 CCINQ13939 588 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 EMC10Q5UCC4 262 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 MRNIPQ6NTE8 343 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 CES3Q6UWW8 571 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 KIAA0408Q6ZU52 694 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 PPM1NQ8N819 430 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 MDGA1Q8NFP4 955 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 OR13J1Q8NGT2 312 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 OR6P1Q8NGX9 317 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 OR2T3Q8NH03 318 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 FAM76AQ8TAV0 307 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 SLC44A1Q8WWI5 657 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 SGSM3Q96HU1 749 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 FAM129BQ96TA1 746 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 ACOX2Q99424 681 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 PAFAH2Q99487 392 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 CPNE1Q99829 537 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 HDAC8Q9BY41 377 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 CDH19Q9H159 772 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 ADAM21Q9UKJ8 722 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 MYLKQ15746 1914 aa13.71□□□□□ -0.22
VAPB-202ENST00000395802 MUC22E2RYF6 1773 aaPredicted RBP13.71□□□□□ -0.22
VAPB-202ENST00000395802 COL4A2P08572 1712 aa13.7□□□□□ -0.22
VAPB-202ENST00000395802 H0Y858 1186 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms