RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 IGLV3-25P01717 112 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CTSHP09668 335 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CCDC166P0CW27 439 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 YWHAQP27348 245 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 ALDH3B2P48448 385 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CLCNKBP51801 687 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CRYBB1P53674 252 aaPredicted RBP18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 FAM45BPQ6NSW5 357 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 KIAA0408Q6ZU52 694 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 FAM45AQ8TCE6 357 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 ANKRD49Q8WVL7 239 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 MYLPFQ96A32 169 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 TMIGD2Q96BF3 282 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC25A23Q9BV35 468 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 NOL11Q9H8H0 719 aaKnown RBP18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 PREBQ9HCU5 417 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 CROCCQ5TZA2 2017 aa18.42■□□□□ 0.54
PCDHA1-202ENST00000394633 H3BNH8 94 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 PLOD2O00469 737 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 TBC1D25Q3MII6 688 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 SAMD4BQ5PRF9 694 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 CLEC6AQ6EIG7 209 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 SLAIN1Q8ND83 568 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 RIN3Q8TB24 985 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 RANBP9Q96S59 729 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC39A3Q9BRY0 314 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 PRKD2Q9BZL6 878 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 OLAHQ9NV23 265 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 THEGQ9P2T0 379 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 TRAF6Q9Y4K3 522 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 ZNF839A8K0R7 811 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 HTRA2O43464 458 aaPredicted RBP18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 TRMUO75648 421 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 MT-CO1P00395 513 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 PYGLP06737 847 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 CYP2C18P33260 490 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 GALNT1Q10472 559 aaPredicted RBP18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 EIF4EBP2Q13542 120 aaPredicted RBP18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 PCSK7Q16549 785 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 TAF2Q6P1X5 1199 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 HACD2Q6Y1H2 254 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 TRIML2Q8N7C3 387 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 FAM110BQ8TC76 370 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 PBXIP1Q96AQ6 731 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 CAAP1Q9H8G2 361 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 FBRSL1Q9HCM7 1045 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 TIMMDC1Q9NPL8 285 aa18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 TRMT13Q9NUP7 481 aaKnown RBP18.41■□□□□ 0.54
PCDHA1-202ENST00000394633 PATJQ8NI35 1801 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 PTPRDP23468 1912 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 PAGE1O75459 146 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 TIPRLO75663 272 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 RBP1P09455 135 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 TSPAN8P19075 237 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 BDNFP23560 247 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 HOXC13P31276 330 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 LEPRP48357 1165 aaKnown RBP18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 CLCN5P51795 746 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC7A2P52569 658 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 ACLYP53396 1101 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 SLC14A2Q15849 920 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 PITRM1Q5JRX3 1037 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 MANEALQ5VSG8 457 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 KLC3Q6P597 504 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 LARP4Q71RC2 724 aaKnown RBP eCLIP18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 SERINC5Q86VE9 423 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 FUNDC1Q8IVP5 155 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 UBXN10Q96LJ8 280 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 RTP3Q9BQQ7 232 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 DUS2Q9NX74 493 aaKnown RBP18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 MIOSQ9NXC5 875 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 MYRFQ9Y2G1 1151 aa18.4■□□□□ 0.54
PCDHA1-202ENST00000394633 ATP6AP2A0A1C7CYW4 349 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 IRAK2O43187 625 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 ATP6AP2O75787 350 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 CKMT2P17540 419 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 WNT3AP56704 352 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 ACAP2Q15057 778 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 HECTD2Q5U5R9 776 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 RNF180Q86T96 592 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 DHFR2Q86XF0 187 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 GAD1Q99259 594 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 HMX1Q9NP08 348 aaPredicted RBP18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 PNPLA3Q9NST1 481 aa18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 RSL24D1Q9UHA3 163 aaKnown RBP18.39■□□□□ 0.54
PCDHA1-202ENST00000394633 SOCS2O14508 198 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 ALDOCP09972 364 aaKnown RBP18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 ATP6V1B2P21281 511 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 KCNC1P48547 511 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 KDELC1Q6UW63 502 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 TMEM207Q6UWW9 146 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 SLC22A9Q8IVM8 553 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 LZTR1Q8N653 840 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 ANKFN1Q8N957 763 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 PCSK9Q8NBP7 692 aaKnown RBP18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 GAB3Q8WWW8 586 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 C3orf30Q96M34 536 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 PPP1R2P1Q96PQ5 205 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 EFHD1Q9BUP0 239 aa18.39■□□□□ 0.53
PCDHA1-202ENST00000394633 CATSPERBQ9H7T0 1116 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms