RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ATXN1LP0C7T5 689 aaKnown RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 FTH1P19P0C7X4 201 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 NFKB1P19838 968 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 TGM2P21980 687 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 VIPR1P32241 457 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 CD68P34810 354 aaPredicted RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 HNF1BP35680 557 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 ETV3P41162 512 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 GRK6P43250 576 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 RABIFP47224 123 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 SUOXP51687 545 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 CLDN6P56747 220 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 RWDD2BP57060 319 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 POLR2LP62875 67 aaKnown RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 OTUD4Q01804 1114 aaKnown RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 WASHC5Q12768 1159 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 OVGP1Q12889 678 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 EIF2B5Q13144 721 aaKnown RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 INPP5AQ14642 412 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 NOMO1Q15155 1222 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PPP2R5EQ16537 467 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PCSK7Q16549 785 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 LRRC66Q68CR7 880 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 ALG1LQ6GMV1 187 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 DBX2Q6ZNG2 339 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 KANSL1Q7Z3B3 1105 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PEX26Q7Z412 305 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLCO6A1Q86UG4 719 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PARGQ86W56 976 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 MARCH9Q86YJ5 346 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 LRRC8AQ8IWT6 810 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 SLC25A45Q8N413 288 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 DENND6BQ8NEG7 585 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 TFB1MQ8WVM0 346 aaKnown RBP7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 ASB12Q8WXK4 309 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 P3H4Q92791 437 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 FATE1Q969F0 183 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 OSBPL8Q9BZF1 889 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 ERVMER34-1Q9H9K5 563 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PCDH9Q9HC56 1237 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 TOR4AQ9NXH8 423 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 UBP1Q9NZI7 540 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 AMFRQ9UKV5 643 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PHTF1Q9UMS5 762 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 GUCA1BQ9UMX6 200 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 PCDHGB2Q9Y5G2 931 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 NCOR2Q9Y618 2525 aa7.69□□□□□ -1.18
HMGB3P1-201ENST00000393368 A0A0J9YYE9 177 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 SPTY2D1-AS1A0A0U1RR47 76 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 TCRBV7S2A1N4TA0A589 114 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCDC66A2RUB6 948 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 GOLGA6CA6NDK9 693 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 GOLGA6BA6NDN3 693 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 GOLGA6L3A6NEY3 463 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 H7C0C1 242 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 ARHGAP6O43182 974 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 HYAL3O43820 417 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 PMPCBO75439 489 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 PIAS2O75928 621 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 CLDN7O95471 211 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 TRBC1P01850 177 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 C1SP09871 688 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 PIRTP0C851 137 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 GOLGA6DP0CG33 693 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 JUNDP17535 347 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 DGKAP23743 735 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 RBL1P28749 1068 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 PMLP29590 882 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 ATP5OP48047 213 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 RXRGP48443 463 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 NR2C2P49116 596 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 THOP1P52888 689 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 EPHB1P54762 984 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 C1orf61Q13536 156 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 SUZ12Q15022 739 aaKnown RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 QPCTQ16769 361 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 RALGPS1Q5JS13 557 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 CCDC181Q5TID7 509 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 CRTC1Q6UUV9 634 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 Q6ZVL8 140 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 BBS12Q6ZW61 710 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 USP45Q70EL2 814 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 RD3Q7Z3Z2 195 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZSCAN30Q86W11 494 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZNF567Q8N184 647 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 CHCHD4Q8N4Q1 142 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 OXR1Q8N573 874 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 ZNF548Q8NEK5 533 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 ACTL9Q8TC94 416 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 PTCD2Q8WV60 388 aaKnown RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 TSACCQ96A04 125 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 NUS1Q96E22 293 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 IMP4Q96G21 291 aaKnown RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 PDXPQ96GD0 296 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 CNDP2Q96KP4 475 aaKnown RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 COQ10AQ96MF6 247 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 QKIQ96PU8 341 aaKnown RBP eCLIP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 MCCC1Q96RQ3 725 aaPredicted RBP7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 AGAP2Q99490 1192 aa7.68□□□□□ -1.18
HMGB3P1-201ENST00000393368 APOOQ9BUR5 198 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms