RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 TBC1D30Q9Y2I9 924 aa12.34□□□□□ -0.43
RFC5-201ENST00000392542 SLC12A8A0AV02 714 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 CCDC189A1A4V9 331 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 UBFD1O14562 309 aaKnown RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 DENRO43583 198 aaKnown RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 GPC4O75487 556 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 IGLV3-27P01718 113 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 FGF1P05230 155 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 HMBSP08397 361 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 HLA-DPA1P20036 260 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 FDXRP22570 491 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 KCNC1P48547 511 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 YBEYP58557 167 aaPredicted RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 PDAP1Q13442 181 aaKnown RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 LAMB3Q13751 1172 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 LRP8Q14114 963 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 PPP1R3AQ16821 1122 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 CTXN3Q4LDR2 81 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 AGKQ53H12 422 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 SLC30A9Q6PML9 568 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 UGT2A3Q6UWM9 527 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 MARVELD2Q8N4S9 558 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 PCDH20Q8N6Y1 951 aaKnown RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 ATAD1Q8NBU5 361 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 ADCY4Q8NFM4 1077 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 ZNF483Q8TF39 744 aaPredicted RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 PEX13Q92968 403 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 FEM1CQ96JP0 617 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 KLHL32Q96NJ5 620 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 CENPKQ9BS16 269 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 UNC93B1Q9H1C4 597 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.33□□□□□ -0.43
RFC5-201ENST00000392542 ADA2Q9NZK5 511 aa12.33□□□□□ -0.43
RFC5-201ENST00000392542 SUCOQ9UBS9 1254 aaKnown RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 MTF2Q9Y483 593 aaPredicted RBP12.33□□□□□ -0.43
RFC5-201ENST00000392542 FBP2O00757 339 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 PRAMEF11O60813 436 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 SUPT7LO94864 414 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 RTN3O95197 1032 aaPredicted RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 GLP2RO95838 553 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 GOT2P00505 430 aaKnown RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 CD1DP15813 335 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 HOXB8P17481 243 aaPredicted RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 ACVRL1P37023 503 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 MAPKAPK2P49137 400 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 CHN2P52757 468 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 LIN52Q52LA3 116 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 UNC50Q53HI1 259 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 C10orf120Q5SQS8 335 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 ACBD5Q5T8D3 534 aaPredicted RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 ZNF549Q6P9A3 640 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 SPATA24Q86W54 205 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 LILRA2Q8N149 483 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 PCSK9Q8NBP7 692 aaKnown RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 SPDYE1Q8NFV5 336 aaPredicted RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 GPR150Q8NGU9 434 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 SH3RF2Q8TEC5 729 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 PTERQ96BW5 349 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 ASB9Q96DX5 294 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 DNAJC1Q96KC8 554 aaKnown RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 PKP2Q99959 881 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 TLR8Q9NR97 1041 aaKnown RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 PAPOLBQ9NRJ5 636 aaKnown RBP12.33□□□□□ -0.44
RFC5-201ENST00000392542 RAB26Q9ULW5 256 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 CRYL1Q9Y2S2 319 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 CENPFP49454 3210 aa12.33□□□□□ -0.44
RFC5-201ENST00000392542 GREB1Q4ZG55 1949 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 CD3EAPO15446 510 aaKnown RBP12.32□□□□□ -0.44
RFC5-201ENST00000392542 AP1G1O43747 822 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 GJB3O75712 270 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 RPP40O75818 363 aaKnown RBP12.32□□□□□ -0.44
RFC5-201ENST00000392542 SLC4A1P02730 911 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 CAPNS1P04632 268 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 SNRPB2P08579 225 aaKnown RBP12.32□□□□□ -0.44
RFC5-201ENST00000392542 ATP4BP51164 291 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 ATXN3P54252 364 aaPredicted RBP12.32□□□□□ -0.44
RFC5-201ENST00000392542 FAM189BP81408 668 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 TAF10Q12962 218 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 ZNF235Q14590 738 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 TLR1Q15399 786 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 RASIP1Q5U651 963 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 LARP4Q71RC2 724 aaKnown RBP eCLIP12.32□□□□□ -0.44
RFC5-201ENST00000392542 SAPCD2Q86UD0 394 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 FAM156AQ8NDB6 213 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 BLOC1S5Q8TDH9 187 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 FAM193BQ96PV7 902 aaPredicted RBP12.32□□□□□ -0.44
RFC5-201ENST00000392542 Q9H521 79 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 CCDC167Q9P0B6 97 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 C15orf38-AP3S2A0A0A6YYH1 394 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 OR6C75A6NL08 312 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 E7ENX8 843 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 MUSKO15146 869 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 DNAJA2O60884 412 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 SOAT2O75908 522 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 EPOP01588 193 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 CKBP12277 381 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 TCN1P20061 433 aaPredicted RBP12.32□□□□□ -0.44
RFC5-201ENST00000392542 OR1E1P30953 314 aa12.32□□□□□ -0.44
RFC5-201ENST00000392542 SUOXP51687 545 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms