RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 TNNI3P19429 210 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 TGM3Q08188 693 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ACSM2AQ08AH3 577 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 HERC3Q15034 1050 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 PDIA6Q15084 440 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ACSM2BQ68CK6 577 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ANKRD13AQ8IZ07 590 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 NODALQ96S42 347 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 TNKS2Q9H2K2 1166 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 TIMM13Q9Y5L4 95 aaPredicted RBP16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ATF6P18850 670 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 PBX1P40424 430 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 CLCN5P51795 746 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ATG4CQ96DT6 458 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ACAT2Q9BWD1 397 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 MALT1Q9UDY8 824 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 SUV39H1O43463 412 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 EIF4BP23588 611 aaKnown RBP16.19■□□□□ 0.18
SHANK1-204ENST00000391814 RENBPP51606 427 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 E2F2Q14209 437 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 GALNT3Q14435 633 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ULK3Q6PHR2 472 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 TNFRSF25Q93038 417 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 NLNQ9BYT8 704 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 TCRBV5S4A2TA0A5A2 114 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 MID1O15344 667 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 H6PDO95479 791 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 UGT2B4P06133 528 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 VPS26BQ4G0F5 336 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 NIPAL1Q6NVV3 410 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 OR52K2Q8NGK3 314 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 C7orf26Q96N11 449 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 FEM1AQ9BSK4 669 aa16.19■□□□□ 0.18
SHANK1-204ENST00000391814 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 SMCO1Q147U7 214 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 XRRA1Q6P2D8 792 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 FBXO42Q6P3S6 717 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 APTXQ7Z2E3 356 aaKnown RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 GPR65Q8IYL9 337 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 MAB21L3Q8N8X9 362 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 CYP2W1Q8TAV3 490 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 EBF2Q9HAK2 575 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 BPIFA1Q9NP55 256 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 FAM47E-STBD1D6RA91 191 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PLK4O00444 970 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 FSCN2O14926 492 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 RAMP2O60895 175 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 USP17L7P0C7H9 530 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 DGKAP23743 735 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 CBFBQ13951 182 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PPM1LQ5SGD2 360 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 IRF2BP2Q7Z5L9 587 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 FBXL16Q8N461 479 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 SLC44A1Q8WWI5 657 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 ZBTB45Q96K62 511 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 RGS17Q9UGC6 210 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PDE10AQ9Y233 779 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 LACTBL1A8MY62 500 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 RNASEH1O60930 286 aaKnown RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PRDX6P30041 224 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 LHX1P48742 406 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 IQCF2Q8IXL9 164 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 NETO2Q8NC67 525 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 IPCEF1Q8WWN9 437 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 GPR75-ASB3A0A0A6YYF3 556 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PGLSO95336 258 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PIK3CGP48736 1102 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 POLR2JP52435 117 aaKnown RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 BNIP3Q12983 259 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 HHIPL2Q6UWX4 724 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PANX1Q96RD7 426 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 TRAF6Q9Y4K3 522 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 CASTOR2A6NHX0 329 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 RFXANKO14593 260 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 GABBR2O75899 941 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 ADRB2P07550 413 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 PRKAR2AP13861 404 aaKnown RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 ARF4P18085 180 aaPredicted RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 FMO3P31513 532 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 LRRC55Q6ZSA7 311 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 TMEM159Q96B96 161 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 TLR8Q9NR97 1041 aaKnown RBP16.18■□□□□ 0.18
SHANK1-204ENST00000391814 GRHL1Q9NZI5 618 aa16.18■□□□□ 0.18
SHANK1-204ENST00000391814 STX16-NPEPL1H3BU86 382 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 STX16O14662 325 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 FABP3P05413 133 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 EIF2S3P41091 472 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 PPP2R2BQ00005 443 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 SMARCB1Q12824 385 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 SEMA5AQ13591 1074 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 SYCE2Q6PIF2 218 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 OR2T12Q8NG77 320 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 ABCG2Q9UNQ0 655 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 OR14I1A6ND48 311 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 TRIM3O75382 744 aaPredicted RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 PAEPP09466 180 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 FAUP35544 74 aaKnown RBP16.17■□□□□ 0.18
SHANK1-204ENST00000391814 MAGEA2P43356 314 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 RNF157Q96PX1 679 aa16.17■□□□□ 0.18
SHANK1-204ENST00000391814 VAT1Q99536 393 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms