RNA–Protein interactions for RNA: ENST00000384526.1

RNU6-880P-201, Transcript of RNA, U6 small nuclear 880, pseudogene, humanhuman

BASIC

Gene RNU6-880P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-880P-201ENST00000384526 CAVIN2O95810 425 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 IGHV3-13P01766 116 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 IGKV3-11P04433 115 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 MYL4P12829 197 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 CORO1AP31146 461 aaKnown RBP0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 STX2P32856 288 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 CLCNKAP51800 687 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 RCAN1P53805 252 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 EVA1CP58658 441 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 SNRPD1P62314 119 aaKnown RBP0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 CCDC96Q2M329 555 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 PLEKHG6Q3KR16 790 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 FASTKD1Q53R41 847 aaKnown RBP0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 KRTCAP3Q53RY4 240 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 FAM171BQ6P995 826 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 Q6ZSR9 355 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 MFSD6Q6ZSS7 791 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 MARCH9Q86YJ5 346 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 ZNF34Q8IZ26 560 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 RNF113BQ8IZP6 322 aaKnown RBP0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 PRPF38AQ8NAV1 312 aaKnown RBP0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 CEP70Q8NHQ1 597 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 ZNF721Q8TF20 911 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 DRC1Q96MC2 740 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 STRBPQ96SI9 672 aaKnown RBP0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 YME1L1Q96TA2 773 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 HAUS8Q9BT25 410 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 CHRDL1Q9BU40 450 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 TRIM31Q9BZY9 425 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 SLITRK2Q9H156 845 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 CCDC134Q9H6E4 229 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 ACAD9Q9H845 621 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 CERS4Q9HA82 394 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 DTNAQ9Y4J8 743 aa0.57□□□□□ -2.32
RNU6-880P-201ENST00000384526 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 MEX3AA1L020 520 aaKnown RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 FAM220BPB1ANY3 271 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 ALG1L2C9J202 215 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 AKR1B15C9JRZ8 316 aaPredicted RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 CLIC2O15247 247 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 NDST3O95803 873 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 CLPTM1O96005 669 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 TFPIP10646 304 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 LYL1P12980 280 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 UGT1A4P22310 534 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 TTKP33981 857 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 CENPAP49450 140 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 CDK18Q07002 472 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 GTF2H2Q13888 395 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 TTF1Q15361 905 aaPredicted RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 SAFBQ15424 915 aaKnown RBP eCLIP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 CTF1Q16619 201 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 ME3Q16798 604 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 RGMBQ6NW40 437 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 AADACL2Q6P093 401 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 GTF2H2CQ6P1K8 395 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 B3GNT6Q6ZMB0 384 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 EPM2AIP1Q7L775 607 aaPredicted RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 KRT77Q7Z794 578 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 TMTC1Q8IUR5 882 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 C17orf47Q8NEP4 570 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 OR2AK2Q8NG84 335 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 OR52I2Q8NH67 350 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 MRGPRDQ8TDS7 321 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 RNF183Q96D59 192 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 LINGO1Q96FE5 620 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 MPHOSPH8Q99549 860 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 SDHCQ99643 169 aaPredicted RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 RHOBTB2Q9BYZ6 727 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 PUS3Q9BZE2 481 aaKnown RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 SIX2Q9NPC8 291 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 PNMA8BQ9ULN7 279 aaPredicted RBP0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 KCNJ14Q9UNX9 436 aa0.56□□□□□ -2.32
RNU6-880P-201ENST00000384526 SMCHD1A6NHR9 2005 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 MACF1Q9UPN3 7388 aaKnown RBP0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 PALM2-AKAP2B1ALY0 433 aaPredicted RBP0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 SLCO1B7G3V0H7 640 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 SLC22A2O15244 555 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 SLC25A17O43808 307 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 RGS11O94810 467 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 HEXIM1O94992 359 aaKnown RBP0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 ACADMP11310 421 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 ITGAXP20702 1163 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 HNF4AP41235 474 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 SKIV2L2P42285 1042 aaKnown RBP0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 CACNB3P54284 484 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 ALKBH1Q13686 389 aaKnown RBP0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 ZNF234Q14588 700 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 RPE65Q16518 533 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 MAPKAPK3Q16644 382 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 GPATCH4Q5T3I0 446 aaKnown RBP0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 FHL5Q5TD97 284 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 KLHDC7AQ5VTJ3 777 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 GALNT7Q86SF2 657 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 GALNT15Q8N3T1 639 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 ZNF611Q8N823 705 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 KLHL30-AS1Q8NEE0 82 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 PRSS33Q8NF86 280 aa0.55□□□□□ -2.32
RNU6-880P-201ENST00000384526 MAGEC3Q8TD91 643 aa0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms