RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 TMEM39AQ9NV64 488 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 NFS1Q9Y697 457 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 MAGEC1O60732 1142 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 ANXA6P08133 673 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 POLD2P49005 469 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 ARL4DP49703 201 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 ATP6V0D1P61421 351 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 FAM110CQ1W6H9 321 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 VPS26BQ4G0F5 336 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 PABPC1LQ4VXU2 614 aaKnown RBP17.19■□□□□ 0.34
SGCB-201ENST00000381431 METTL21CQ5VZV1 264 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 PARP8Q8N3A8 854 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 TERB1Q8NA31 727 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 SNX27Q96L92 541 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 TCF12Q99081 682 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 SSU72Q9NP77 194 aaKnown RBP17.19■□□□□ 0.34
SGCB-201ENST00000381431 ZC4H2Q9NQZ6 224 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 COL1A2P08123 1366 aa17.19■□□□□ 0.34
SGCB-201ENST00000381431 LOC100506127A0A0U1RQW1 187 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 FAM149AA5PLN7 773 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 VCLP18206 1134 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 PEX2P28328 305 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 L1CAMP32004 1257 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 GPR156Q8NFN8 814 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 PPP3R2Q96LZ3 170 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 UROC1Q96N76 676 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 PCDH12Q9NPG4 1184 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 BAZ2AQ9UIF9 1905 aaKnown RBP17.18■□□□□ 0.34
SGCB-201ENST00000381431 KNL1Q8NG31 2342 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 SMIM31A0A1B0GVY4 71 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 FAM220BPB1ANY3 271 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 E9PAM4 449 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 CYP7B1O75881 506 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 PPP2R1BP30154 601 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 NCF4Q15080 339 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 TCEA2Q15560 299 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 CYP4Z1Q86W10 505 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 CIR1Q86X95 450 aaPredicted RBP17.18■□□□□ 0.34
SGCB-201ENST00000381431 LMO3Q8TAP4 145 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 B3GALT6Q96L58 329 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 TSSK3Q96PN8 268 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 HNF4AP41235 474 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 CRATP43155 626 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 SETMARQ53H47 684 aaPredicted RBP17.18■□□□□ 0.34
SGCB-201ENST00000381431 GPR107Q5VW38 600 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 ARMC7Q9H6L4 198 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
SGCB-201ENST00000381431 FAM53CQ9NYF3 392 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 AHSPQ9NZD4 102 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 TRIM17Q9Y577 477 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 PCDHGC4Q9Y5F7 938 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 H3BMM5 538 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 CHRNGP07510 517 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 ANXA11P50995 505 aaKnown RBP17.18■□□□□ 0.34
SGCB-201ENST00000381431 ROR2Q01974 943 aaKnown RBP17.18■□□□□ 0.34
SGCB-201ENST00000381431 TNK2Q07912 1038 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 TMEM198Q66K66 360 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 ARMC6Q6NXE6 501 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 LINGO4Q6UY18 593 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 SFRP1Q8N474 314 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 C10orf53Q8N6V4 93 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 SCAMP5Q8TAC9 235 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 MAGEC3Q8TD91 643 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 MAML3Q96JK9 1138 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 RNF39Q9H2S5 420 aa17.18■□□□□ 0.34
SGCB-201ENST00000381431 GNEQ9Y223 722 aaKnown RBP17.18■□□□□ 0.34
SGCB-201ENST00000381431 PTPRJQ12913 1337 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 HCRTO43612 131 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 SLC22A3O75751 556 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 SERPINI2O75830 405 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 GPX6P59796 221 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 ITGADQ13349 1161 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 PLCL1Q15111 1095 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 TRAF7Q6Q0C0 670 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 RALGPS2Q86X27 583 aaPredicted RBP17.17■□□□□ 0.34
SGCB-201ENST00000381431 SPPL2CQ8IUH8 684 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 HOMEZQ8IX15 550 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 BTN2A3PQ96KV6 586 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.17■□□□□ 0.34
SGCB-201ENST00000381431 RNASEH1O60930 286 aaKnown RBP17.17■□□□□ 0.34
SGCB-201ENST00000381431 TCEA3O75764 348 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 OTCP00480 354 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 LYNP07948 512 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 IDO1P14902 403 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 PRKAG1P54619 331 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 NIPA2Q8N8Q9 360 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 OR7D4Q8NG98 312 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 BORCS6Q96GS4 357 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 C12orf42Q96LP6 360 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 SPG21Q9NZD8 308 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 CST1P01037 141 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 PIGRP01833 764 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 ELNP15502 786 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 IDH3AP50213 366 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 ST13P50502 369 aaKnown RBP17.17■□□□□ 0.34
SGCB-201ENST00000381431 SNRPD1P62314 119 aaKnown RBP17.17■□□□□ 0.34
SGCB-201ENST00000381431 CCDC92Q53HC0 331 aaPredicted RBP17.17■□□□□ 0.34
SGCB-201ENST00000381431 FBXL19Q6PCT2 694 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 ABRAXAS1Q6UWZ7 409 aa17.17■□□□□ 0.34
SGCB-201ENST00000381431 OOSP2Q86WS3 158 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms