RNA–Protein interactions for RNA: ENST00000379599.6

NHLRC3-201, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,275 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-201ENST00000379599 SLAMF1Q13291 335 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 SKIV2LQ15477 1246 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 SMAD1Q15797 465 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 C10orf62Q5T681 223 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 ACAD10Q6JQN1 1059 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 TMEM81Q6P7N7 255 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 BNIPLQ7Z465 357 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 METTL23Q86XA0 190 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 NAT8LQ8N9F0 302 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 FNDC5Q8NAU1 212 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 OR4M1Q8NGD0 313 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PCNPQ8WW12 178 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 NEDD4LQ96PU5 975 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 REEP2Q9BRK0 252 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 ZNF577Q9BSK1 485 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 TNKS2Q9H2K2 1166 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 EHD3Q9NZN3 535 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 GMPR2Q9P2T1 348 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 ZC3H7BQ9UGR2 993 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 STOML2Q9UJZ1 356 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 MAGED2Q9UNF1 606 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 FARP1Q9Y4F1 1045 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 CACNG2Q9Y698 323 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 TCRBV3S1A0A5B6 114 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PRORSD1PA6NEY8 169 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 KPNA6O60684 536 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 GOT2P00505 430 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 CFBP00751 764 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 MT-ND1P03886 318 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 FAM86B2P0C5J1 330 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 RPL9P32969 192 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 GRK3P35626 688 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 MCCD1P59942 119 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 ERVFC1P60507 584 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 RUNX1T1Q06455 604 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 INCA1Q0VD86 236 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 FAPQ12884 760 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 CCNJQ5T5M9 372 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 GK5Q6ZS86 529 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 NRARPQ7Z6K4 114 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 P2RY8Q86VZ1 359 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 SLFN12Q8IYM2 578 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 OR4M2Q8NGB6 313 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 ZFAND1Q8TCF1 268 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 MARVELD3Q96A59 401 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 BTN2A3PQ96KV6 586 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 B3GNT2Q9NY97 397 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 RGS17Q9UGC6 210 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 NOCTQ9UK39 431 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 SCML1Q9UN30 329 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 TBX22Q9Y458 520 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 CLRN2A0PK11 232 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 ZNF99A8MXY4 864 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PLA2G6O60733 806 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PROSCO94903 275 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PSMB9P28065 219 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 ERP29P30040 261 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 SHMT2P34897 504 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PPP4CP60510 307 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 DYNLL1P63167 89 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 TEKQ02763 1124 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PPIL2Q13356 520 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 C21orf62-AS1Q17RA5 79 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 GPAT3Q53EU6 434 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 USP17L6PQ6QN14 398 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 LIPIQ6XZB0 460 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 STRADAQ7RTN6 431 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 KIF18BQ86Y91 864 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 SPPL2CQ8IUH8 684 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 TRIM48Q8IWZ4 208 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 DYNC2LI1Q8TCX1 351 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 RORBQ92753 470 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 FAM149B1Q96BN6 582 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 TWNKQ96RR1 684 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 UHRF1Q96T88 793 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 CNPY3Q9BT09 278 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 CHRAC1Q9NRG0 131 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 IL17RBQ9NRM6 502 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 PAK1IP1Q9NWT1 392 aaPredicted RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 DRG1Q9Y295 367 aaKnown RBP8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 DAGLAQ9Y4D2 1042 aa8.53□□□□□ -1.04
NHLRC3-201ENST00000379599 DHRS12A0PJE2 317 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 MEIOCA2RUB1 952 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 AGAP5A6NIR3 686 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 GRIN3BO60391 1043 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 PTP4A3O75365 173 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 PPM1BO75688 479 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 FCER2P06734 321 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 CCNYL3P0C7X3 344 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 SCNN1GP51170 649 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 TPMTP51580 245 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 NRLP54845 237 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 GP2P55259 537 aaKnown RBP8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 S100A12P80511 92 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 EFR3AQ14156 821 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 PRPSAP1Q14558 356 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 STARD3Q14849 445 aa8.52□□□□□ -1.05
NHLRC3-201ENST00000379599 ACOX1Q15067 660 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms