RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 TCAIMQ8N3R3 496 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 MRPL57Q9BQC6 102 aaKnown RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 GULP1Q9UBP9 304 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 EFR3BQ9Y2G0 817 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 ISM1B1AKI9 464 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 DDX6P26196 483 aaKnown RBP eCLIP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 MAGEA2P43356 314 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 CAPZA1P52907 286 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 C1orf189Q5VU69 101 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 TTC29Q8NA56 475 aaPredicted RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 SRFBP1Q8NEF9 429 aaKnown RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PAIP1Q9H074 479 aaKnown RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PLOD3O60568 738 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 MOXD1Q6UVY6 613 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 EMC1Q8N766 993 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 ATP5A1P25705 553 aaKnown RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 TCHHL1Q5QJ38 904 aaPredicted RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FBXO22Q8NEZ5 403 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 ERVW-1Q9UQF0 538 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 NFASCO94856 1347 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 LRRC72A6NJI9 287 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 LARGE1O95461 756 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 RIPK1Q13546 671 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 ALG10Q5BKT4 473 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FIBCD1Q8N539 461 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 REPS2Q8NFH8 660 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 C1orf216Q8TAB5 229 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FBXO9Q9UK97 447 aaPredicted RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 SUV39H1O43463 412 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 OTCP00480 354 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 DBIP07108 87 aaKnown RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 ERCC1P07992 297 aaPredicted RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 OAZ1P54368 228 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 BDH1Q02338 343 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 PRR23BQ6ZRT6 265 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 FAM124AQ86V42 546 aa11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 NMD3Q96D46 503 aaKnown RBP11.26□□□□□ -0.61
PTCHD1-201ENST00000379361 UBE2Q2LH0YL09 131 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 TRAFD1O14545 582 aaPredicted RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 EIF4BP23588 611 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 C1QBPQ07021 282 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 TAF5Q15542 800 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 STAG3L4Q8TBR4 150 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 EPS8L3Q8TE67 593 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 PNPLA8Q9NP80 782 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 HAO1Q9UJM8 370 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 MAP3K6O95382 1288 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 GLUD1P00367 558 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 SP100P23497 879 aaPredicted RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 DUS1LQ6P1R4 473 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 SNIP1Q8TAD8 396 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 PPCDCQ96CD2 204 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 THAP2Q9H0W7 228 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 TMEM27Q9HBJ8 222 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 TULP3O75386 442 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 PAPSS2O95340 614 aaPredicted RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CNSTQ6PJW8 725 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 SERPINA3P01011 423 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CXCL8P10145 99 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 RAP1GAP2Q684P5 730 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 VCPIP1Q96JH7 1222 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 PGLYRP2Q96PD5 576 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 EBNA1BP2Q99848 306 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 SPATC1LQ9H0A9 340 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC40A1Q9NP59 571 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ACAP1Q15027 740 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CPTPQ5TA50 214 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 PIH1D2Q8WWB5 315 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 APOL2Q9BQE5 337 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CCNB1IP1Q9NPC3 277 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 L1RE1Q9UN81 338 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 PRKAB1Q9Y478 270 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 TNFAIP8L3Q5GJ75 292 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 FAM84BQ96KN1 310 aaPredicted RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 TBC1D24Q9ULP9 559 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 REREQ9P2R6 1566 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 MRASO14807 208 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ATG13O75143 517 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ERVK-21P61565 698 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 RUNDC3AQ59EK9 446 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CWF19L1Q69YN2 538 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CRTC3Q6UUV7 619 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 DENND1CQ8IV53 801 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ATP6V1C2Q8NEY4 427 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 SLC16A10Q8TF71 515 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ALG9Q9H6U8 611 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 AGPAT5Q9NUQ2 364 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 GRIP1Q9Y3R0 1128 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 FDPSP14324 419 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ECHS1P30084 290 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 NUMBP49757 651 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 IST1P53990 364 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 MANFP55145 182 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ADAM8P78325 824 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ZNF540Q8NDQ6 660 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 ZIM3Q96PE6 472 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CCDC86Q9H6F5 360 aaKnown RBP11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 PCDH12Q9NPG4 1184 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.25□□□□□ -0.61
PTCHD1-201ENST00000379361 CCKBRP32239 447 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms