RNA–Protein interactions for RNA: ENST00000379019.5

GPCPD1-201, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPCPD1, Length 5,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-201ENST00000379019 POLR3BQ9NW08 1133 aaPredicted RBP7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 PCDHGC3Q9UN70 934 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 IRAK3Q9Y616 596 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 K7ERI5 159 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 OGTO15294 1046 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 EPHA2P29317 976 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 CD6P30203 668 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 PIGAP37287 484 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 CBX3Q13185 183 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 LRP8Q14114 963 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 NEK10Q6ZWH5 1172 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 DDX53Q86TM3 631 aaKnown RBP7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 COLGALT1Q8NBJ5 622 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 RNF149Q8NC42 400 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 HBEGFQ99075 208 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 IL1RL2Q9HB29 575 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 NCKIPSDQ9NZQ3 722 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 FETUBQ9UGM5 382 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 MYO10Q9HD67 2058 aa7.4□□□□□ -1.22
GPCPD1-201ENST00000379019 OR51F1A6NGY5 319 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 UPK1AO00322 258 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 SNAP29O95721 258 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 CYP2F1P24903 491 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 PRAMEP78395 509 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 IFITM2Q01629 132 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 C16orf72Q14CZ0 275 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 SOWAHCQ53LP3 525 aaPredicted RBP7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 FYB2Q5VWT5 728 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 PELI3Q8N2H9 469 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 ESAMQ96AP7 390 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 CDT1Q9H211 546 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 CYP4F12Q9HCS2 524 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 M0QYV0 167 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 NME4O00746 187 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 HTRA2O43464 458 aaPredicted RBP7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 IMPDH2P12268 514 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 ALDH4A1P30038 563 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 MAGEA6P43360 314 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 ROR1Q01973 937 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 MBTD1Q05BQ5 628 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 DBPQ10586 325 aaPredicted RBP7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 SF3B4Q15427 424 aaKnown RBP eCLIP7.4□□□□□ -1.234e-7■■■■□ 24.2
GPCPD1-201ENST00000379019 LRRC38Q5VT99 294 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 FSTL5Q8N475 847 aaPredicted RBP7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 NXNL1Q96CM4 212 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 ZNF597Q96LX8 424 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 TMEM74Q96NL1 305 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 TBCBQ99426 244 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 CRISPLD1Q9H336 500 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 CAAP1Q9H8G2 361 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 SLC6A13Q9NSD5 602 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 PIGVQ9NUD9 493 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 FAM105AQ9NUU6 356 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 PTTG2Q9NZH5 202 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 ERVK-11Q9UQG0 969 aa7.4□□□□□ -1.23
GPCPD1-201ENST00000379019 PTPRSQ13332 1948 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 SDHDO14521 159 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 VTNP04004 478 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CA3P07451 260 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CA5AP35218 305 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 GGT5P36269 586 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 GABRB2P47870 512 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 C6orf183Q5T699 404 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 PABPC5Q96DU9 382 aaKnown RBP7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 NECTIN4Q96NY8 510 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 FAM192AQ9GZU8 254 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 ZNF696Q9H7X3 374 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 GPAMQ9HCL2 828 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 DNAJC28Q9NX36 388 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CD300AQ9UGN4 299 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 MTCH2Q9Y6C9 303 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CCDC160A6NGH7 325 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 H3BNH8 94 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CTNNB1P35222 781 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 RELAQ04206 551 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 GRB7Q14451 532 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 RABL3Q5HYI8 236 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 TJAP1Q5JTD0 557 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 TMEM179BQ7Z7N9 219 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 LGI2Q8N0V4 545 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 PGBD5Q8N414 524 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 BBOF1Q8ND07 529 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CASP10Q92851 521 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 ACDQ96AP0 544 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CASD1Q96PB1 797 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 HEPHQ9BQS7 1158 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 PAAF1Q9BRP4 392 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 NTN4Q9HB63 628 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 ITM2CQ9NQX7 267 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 CCDC167Q9P0B6 97 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 GALPQ9UBC7 116 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 NLRC5Q86WI3 1866 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 KRT87PA6NCN2 255 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 ZBTB24O43167 697 aaPredicted RBP7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 SIX3O95343 332 aaPredicted RBP7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 GSTT2P0CG29 244 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 GSTT2BP0CG30 244 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 AGXTP21549 392 aa7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 RPL9P32969 192 aaKnown RBP7.39□□□□□ -1.23
GPCPD1-201ENST00000379019 ZNF143P52747 638 aaPredicted RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms