RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 GMLQ99445 158 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 EML4Q9HC35 981 aaKnown RBP15.92■□□□□ 0.14
CKAP4-201ENST00000378026 SEPT3Q9UH03 358 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 FER1L6Q2WGJ9 1857 aa15.92■□□□□ 0.14
CKAP4-201ENST00000378026 MBL2P11226 248 aaPredicted RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ALDH4A1P30038 563 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 HADHAP40939 763 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 MATKP42679 507 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 NPY2RP49146 381 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 PCYT1AP49585 367 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 RPS3AP61247 264 aaKnown RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 OCA2Q04671 838 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 CDH17Q12864 832 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 RPS6KA2Q15349 733 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ZNF789Q5FWF6 425 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ITIH5Q86UX2 942 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 STARD8Q92502 1023 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 SH3YL1Q96HL8 342 aaPredicted RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 RNF145Q96MT1 663 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 AKTIPQ9H8T0 292 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 CD320Q9NPF0 282 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 GINS2Q9Y248 185 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 MAGEB16A2A368 324 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 AQP12BA6NM10 295 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 IPO13O94829 963 aaKnown RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 GFAPP14136 432 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 PLA2G16P53816 162 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 BCAT1P54687 386 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 TMBIM6P55061 237 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 TPD52P55327 224 aaPredicted RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ATP6V0D1P61421 351 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 AQP6Q13520 282 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 PYCR3Q53H96 274 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 KCTD11Q693B1 232 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 CRTC3Q6UUV7 619 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 SPRED1Q7Z699 444 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 AQP12AQ8IXF9 295 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 RYBPQ8N488 228 aaPredicted RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ZUFSPQ96AP4 578 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 PALMDQ9NP74 551 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 PIGVQ9NUD9 493 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 TMEM9Q9P0T7 183 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 COL11A2P13942 1736 aaPredicted RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ANK1P16157 1881 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 H3BMM5 538 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 VTNP04004 478 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ARF4P18085 180 aaPredicted RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 BST2Q10589 180 aaKnown RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 OXA1LQ15070 435 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 BROXQ5VW32 411 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 C8orf82Q6P1X6 216 aaPredicted RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ZNF773Q6PK81 442 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 CYHR1Q6ZMK1 362 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 STRADAQ7RTN6 431 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 SFRP1Q8N474 314 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 VPS33AQ96AX1 596 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 NRBF2Q96F24 287 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 FEM1CQ96JP0 617 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 SNX27Q96L92 541 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 TMEM74Q96NL1 305 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 EIF2AQ9BY44 585 aaKnown RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 CCDC90BQ9GZT6 254 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 GBA3Q9H227 469 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ASB7Q9H672 318 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ITGB1BP2Q9UKP3 347 aa15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ZFC3H1O60293 1989 aaKnown RBP15.91■□□□□ 0.14
CKAP4-201ENST00000378026 ZBBXA8MT70 800 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 CLDN25C9JDP6 229 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 KPNA6O60684 536 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 GMNNO75496 209 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 ARIH2O95376 493 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 ICAM3P32942 547 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 TPTEP56180 551 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 TPI1P60174 286 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 GRSF1Q12849 480 aaKnown RBP eCLIP15.9■□□□□ 0.14
CKAP4-201ENST00000378026 GRB7Q14451 532 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 SLC25A52Q3SY17 297 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 BTBD8Q5XKL5 378 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 R3HCC1LQ7Z5L2 792 aaKnown RBP15.9■□□□□ 0.14
CKAP4-201ENST00000378026 ZDHHC17Q8IUH5 632 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 SMARCAD1Q9H4L7 1026 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 EVLQ9UI08 416 aaPredicted RBP15.9■□□□□ 0.14
CKAP4-201ENST00000378026 AKT3Q9Y243 479 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 NDUFAF1Q9Y375 327 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 SCN1AP35498 2009 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 IQCA1LA6NCM1 817 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 MYO1DO94832 1006 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 GPX3P22352 226 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 SLC6A2P23975 617 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 AXLP30530 894 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 NOS2P35228 1153 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 RFC2P35250 354 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 CSRP3P50461 194 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 IFITM3Q01628 133 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 ARHGAP17Q68EM7 881 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 XAF1Q6GPH4 301 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 HFE2Q6ZVN8 426 aa15.9■□□□□ 0.14
CKAP4-201ENST00000378026 LARP4Q71RC2 724 aaKnown RBP eCLIP15.9■□□□□ 0.141e-11■□□□□ 8.8
CKAP4-201ENST00000378026 CTU1Q7Z7A3 348 aaKnown RBP15.9■□□□□ 0.14
CKAP4-201ENST00000378026 Q8N9G6 341 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms