RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 C3orf20Q8ND61 904 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 DENND6BQ8NEG7 585 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 ENOX1Q8TC92 643 aaKnown RBP9.64□□□□□ -0.87
C9orf85-202ENST00000377027 ASB12Q8WXK4 309 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 NAF1Q96HR8 494 aaKnown RBP9.64□□□□□ -0.87
C9orf85-202ENST00000377027 FEM1CQ96JP0 617 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 EXOC2Q96KP1 924 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 MAGEH1Q9H213 219 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 CPNE5Q9HCH3 593 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 FANCLQ9NW38 375 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 COQ6Q9Y2Z9 468 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 ENTPD2Q9Y5L3 495 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 CSNK1G3Q9Y6M4 447 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 PIEZO2Q9H5I5 2752 aa9.64□□□□□ -0.87
C9orf85-202ENST00000377027 ARHGEF17Q96PE2 2063 aaPredicted RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 EME2A4GXA9 379 aaPredicted RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 WASH4PA8MWX3 477 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 FPGTO14772 594 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 TSPAN6O43657 245 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 BUB1BO60566 1050 aaPredicted RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 RAMP2O60895 175 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 GM2AP17900 193 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 GPD1P21695 349 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 COPB1P53618 953 aaKnown RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 SERINC3Q13530 473 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 NCAPHQ15003 741 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 POLD3Q15054 466 aaPredicted RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 IRF4Q15306 451 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 SYCP1Q15431 976 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 CA9Q16790 459 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 ISXQ2M1V0 245 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 KLHL40Q2TBA0 621 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 GDPD4Q6W3E5 623 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 CLEC17AQ6ZS10 378 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 EFL1Q7Z2Z2 1120 aaKnown RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 VPS36Q86VN1 386 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 DCP2Q8IU60 420 aaKnown RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 SFTPA2Q8IWL1 248 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 PHACTR4Q8IZ21 702 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 RYBPQ8N488 228 aaPredicted RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 LMX1AQ8TE12 382 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 RAB7BQ96AH8 199 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 ATXN7L3BQ96GX2 97 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 PEBP4Q96S96 227 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 WRAP53Q9BUR4 548 aaKnown RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 SEMA4CQ9C0C4 833 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 TTYH3Q9C0H2 523 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 LRRC19Q9H756 370 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 GPATCH2LQ9NWQ4 482 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 TAS2R14Q9NYV8 317 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 APOBEC3BQ9UH17 382 aaKnown RBP9.63□□□□□ -0.87
C9orf85-202ENST00000377027 FZD10Q9ULW2 581 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 SATB2Q9UPW6 733 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 MFHAS1Q9Y4C4 1052 aa9.63□□□□□ -0.87
C9orf85-202ENST00000377027 COL12A1Q99715 3063 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 TSPAN11A1L157 253 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 SIGLEC16A6NMB1 481 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 RASA4BC9J798 803 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 J3KR12 359 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 EREGO14944 169 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 RRP8O43159 456 aaKnown RBP9.62□□□□□ -0.87
C9orf85-202ENST00000377027 RASA4O43374 803 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 POP4O95707 220 aaKnown RBP9.62□□□□□ -0.87
C9orf85-202ENST00000377027 PRKCGP05129 697 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 ALPPL2P10696 532 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 KRT3P12035 628 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 TSHRP16473 764 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 ACTN2P35609 894 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 LSSP48449 732 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 SNRPD1P62314 119 aaKnown RBP9.62□□□□□ -0.87
C9orf85-202ENST00000377027 CXADRP78310 365 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 CCDC15Q0P6D6 951 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 TCEA2Q15560 299 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 WSCD2Q2TBF2 565 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 TMEM52BQ4KMG9 183 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 PRRT3Q5FWE3 981 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 C3orf38Q5JPI3 329 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 E4F1Q66K89 784 aaPredicted RBP9.62□□□□□ -0.87
C9orf85-202ENST00000377027 MACC1Q6ZN28 852 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 SLFN11Q7Z7L1 901 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 TP53INP2Q8IXH6 220 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 PELI3Q8N2H9 469 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 ZNF843Q8N446 348 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 MSANTD4Q8NCY6 345 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 MAPK15Q8TD08 544 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 VCPIP1Q96JH7 1222 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 ZNF578Q96N58 590 aaPredicted RBP9.62□□□□□ -0.87
C9orf85-202ENST00000377027 MCEEQ96PE7 176 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 DEPDC7Q96QD5 511 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 DUSP23Q9BVJ7 150 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 OSBPL1AQ9BXW6 950 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 RBCK1Q9BYM8 510 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 TRIM7Q9C029 511 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 RETREG1Q9H6L5 497 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 POLR1BQ9H9Y6 1135 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 USP29Q9HBJ7 922 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 TMEM51Q9NW97 253 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 ADAM22Q9P0K1 906 aa9.62□□□□□ -0.87
C9orf85-202ENST00000377027 LIMA1Q9UHB6 759 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms