RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 WDR36Q8NI36 951 aaKnown RBP21.11■□□□□ 0.97
VSX1-201ENST00000376707 PDCD6IPQ8WUM4 868 aaKnown RBP21.11■□□□□ 0.97
VSX1-201ENST00000376707 NSMCE1Q8WV22 266 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 OR1E3Q8WZA6 343 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 NSMCE3Q96MG7 304 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 SLC46A1Q96NT5 459 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 CSPG4P5Q96PW8 444 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 ETNK2Q9NVF9 386 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 IFNKQ9P0W0 207 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 B4GALT6Q9UBX8 382 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 LUC7L2Q9Y383 392 aaKnown RBP21.11■□□□□ 0.97
VSX1-201ENST00000376707 PCDHGC4Q9Y5F7 938 aa21.11■□□□□ 0.97
VSX1-201ENST00000376707 A0A087X0T9 212 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 TEX51A0A1B0GUA7 166 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 ATXN7O15265 892 aaPredicted RBP21.1■□□□□ 0.97
VSX1-201ENST00000376707 KLK10O43240 276 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 SOCS5O75159 536 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 GYPCP04921 128 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 FAM228BP0C875 321 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 RARAP10276 462 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 NFKBIAP25963 317 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 SERPINB6P35237 376 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 TMPRSS3P57727 454 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 TAF8Q7Z7C8 310 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 ARL14Q8N4G2 192 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 ATPAF2Q8N5M1 289 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 NIPA2Q8N8Q9 360 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 OR6C4Q8NGE1 309 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 CPLX3Q8WVH0 158 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 SLC39A7Q92504 469 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 GFM1Q96RP9 751 aaKnown RBP21.1■□□□□ 0.97
VSX1-201ENST00000376707 NUDCD1Q96RS6 583 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 DPH1Q9BZG8 443 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 THAP2Q9H0W7 228 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 WDR26Q9H7D7 661 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 FGF22Q9HCT0 170 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 RABGEF1Q9UJ41 708 aa21.1■□□□□ 0.97
VSX1-201ENST00000376707 ASXL3Q9C0F0 2248 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 CCDC187A0A096LP49 1063 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 NTN3O00634 580 aaPredicted RBP21.09■□□□□ 0.97
VSX1-201ENST00000376707 HTRA2O43464 458 aaPredicted RBP21.09■□□□□ 0.97
VSX1-201ENST00000376707 MAFKO60675 156 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 CPP00450 1065 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 CYP1A2P05177 515 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 HOXC4P09017 264 aaPredicted RBP21.09■□□□□ 0.97
VSX1-201ENST00000376707 GM2AP17900 193 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 PDX1P52945 283 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 SKOR2Q2VWA4 1001 aaPredicted RBP21.09■□□□□ 0.97
VSX1-201ENST00000376707 TEKT4Q8WW24 435 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 SPOCK2Q92563 424 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 PCDH18Q9HCL0 1135 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 MRPL40Q9NQ50 206 aaKnown RBP21.09■□□□□ 0.97
VSX1-201ENST00000376707 IP6K2Q9UHH9 426 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 MOSPD1Q9UJG1 213 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 ANAPC7Q9UJX3 599 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 LRRK1Q38SD2 2015 aa21.09■□□□□ 0.97
VSX1-201ENST00000376707 SMG1Q96Q15 3661 aaKnown RBP21.08■□□□□ 0.97
VSX1-201ENST00000376707 TK2O00142 265 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 PDE2AO00408 941 aaPredicted RBP21.08■□□□□ 0.97
VSX1-201ENST00000376707 TNFRSF10CO14798 259 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 PEX11BO96011 259 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 RPLP0P05388 317 aaKnown RBP21.08■□□□□ 0.97
VSX1-201ENST00000376707 CR2P20023 1033 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 HNRNPH3P31942 346 aaKnown RBP21.08■□□□□ 0.97
VSX1-201ENST00000376707 VIPR1P32241 457 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 TRIM23P36406 574 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 CDH6P55285 790 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 KRT81Q14533 505 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 MARC1Q5VT66 337 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 DENND2CQ68D51 928 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 TXNRD3NBQ6F5E7 133 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 PNCKQ6P2M8 343 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 PGBD5Q8N414 524 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 FAM46DQ8NEK8 389 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 NUS1Q96E22 293 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 CCDC97Q96F63 343 aaPredicted RBP21.08■□□□□ 0.97
VSX1-201ENST00000376707 PRR11Q96HE9 360 aaPredicted RBP21.08■□□□□ 0.97
VSX1-201ENST00000376707 BTBD6Q96KE9 485 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 COQ10AQ96MF6 247 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 MGME1Q9BQP7 344 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 NUP85Q9BW27 656 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 LGR4Q9BXB1 951 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 NOD2Q9HC29 1040 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 CYP4F12Q9HCS2 524 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 NENFQ9UMX5 172 aa21.08■□□□□ 0.97
VSX1-201ENST00000376707 COL27A1Q8IZC6 1860 aaPredicted RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 FASNP49327 2511 aaKnown RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 PMS2P1A4D2B8 440 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 D6RAR5 112 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 TNFSF15O95150 251 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 CYP2A6P11509 494 aaPredicted RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 MLLT3P42568 568 aaPredicted RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 SSR1P43307 286 aaKnown RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 MMP13P45452 471 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 MAXP61244 160 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 CCL7P80098 99 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 NFKBIBQ15653 356 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 CNGA3Q16281 694 aa21.07■□□□□ 0.96
VSX1-201ENST00000376707 TSR1Q2NL82 804 aaKnown RBP21.07■□□□□ 0.96
VSX1-201ENST00000376707 ALKBH5Q6P6C2 394 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 242 ms