RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 C9orf57Q5W0N0 161 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 RIOX2Q8IUF8 465 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 ANKRD13AQ8IZ07 590 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 OR13F1Q8NGS4 319 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 SNX27Q96L92 541 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 WDR6Q9NNW5 1121 aaKnown RBP16.56■□□□□ 0.24
TRIM39-201ENST00000376656 C1orf232A0A0U1RR37 186 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 CFAP99D6REC4 459 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 MTSS1O43312 755 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 FYNP06241 537 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 POLD2P49005 469 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 SLC26A2P50443 739 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 GRSF1Q12849 480 aaKnown RBP eCLIP16.56■□□□□ 0.24
TRIM39-201ENST00000376656 RGS21Q2M5E4 152 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 LRRC52Q8N7C0 313 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 TRPV3Q8NET8 790 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 TRUB1Q8WWH5 349 aaKnown RBP16.56■□□□□ 0.24
TRIM39-201ENST00000376656 TBL1YQ9BQ87 522 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 AKTIPQ9H8T0 292 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 FANCEQ9HB96 536 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 ACTR3BQ9P1U1 418 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 ERGIC3Q9Y282 383 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 RAD54BQ9Y620 910 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 MCM3APO60318 1980 aa16.56■□□□□ 0.24
TRIM39-201ENST00000376656 TMEM247A6NEH6 219 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 KCNH1O95259 989 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 GFAPP14136 432 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 HOXD12P35452 270 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ZNF280AP59817 542 aaPredicted RBP16.55■□□□□ 0.24
TRIM39-201ENST00000376656 CYP51A1Q16850 503 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 LINC00523Q86TU6 105 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 COLGALT2Q8IYK4 626 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ERLEC1Q96DZ1 483 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 C19orf60Q96EN9 201 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 TMEM9Q9P0T7 183 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 FBXO5Q9UKT4 447 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ZSWIM8A7E2V4 1837 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 TSC2P49815 1807 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 TTC24A2A3L6 582 aaPredicted RBP16.55■□□□□ 0.24
TRIM39-201ENST00000376656 INPP4BO15327 924 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 HSD17B1P14061 328 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ELK4P28324 431 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 RPS9P46781 194 aaKnown RBP16.55■□□□□ 0.24
TRIM39-201ENST00000376656 HLCSP50747 726 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ATP4BP51164 291 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ZBTB6Q15916 424 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 IFNEQ86WN2 208 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 LINC01465Q8N7H1 131 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 C2CD4AQ8NCU7 369 aaPredicted RBP16.55■□□□□ 0.24
TRIM39-201ENST00000376656 SLC2A13Q96QE2 648 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 HOPXQ9BPY8 73 aaPredicted RBP16.55■□□□□ 0.24
TRIM39-201ENST00000376656 QTRT2Q9H974 415 aaKnown RBP16.55■□□□□ 0.24
TRIM39-201ENST00000376656 PALMDQ9NP74 551 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 PDGFCQ9NRA1 345 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 RIC8BQ9NVN3 520 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 PKD2L2Q9NZM6 624 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 TRIM17Q9Y577 477 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 SLC6A2P23975 617 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 POU4F1Q01851 419 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 UGT3A2Q3SY77 523 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 DENND5AQ6IQ26 1287 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ARHGAP36Q6ZRI8 547 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 KDELC2Q7Z4H8 507 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 CTU1Q7Z7A3 348 aaKnown RBP16.55■□□□□ 0.24
TRIM39-201ENST00000376656 BEST2Q8NFU1 509 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ANKRD49Q8WVL7 239 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 DPF3Q92784 378 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 VAT1Q99536 393 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 FICDQ9BVA6 458 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 NANOGQ9H9S0 305 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 GID8Q9NWU2 228 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 ERAP1Q9NZ08 941 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 SLC30A1Q9Y6M5 507 aa16.55■□□□□ 0.24
TRIM39-201ENST00000376656 SUPT7LO94864 414 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 CPNE6O95741 557 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 BCL10O95999 233 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 NCAM1P13591 858 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 NCK1P16333 377 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 EEF1B2P24534 225 aaKnown RBP16.54■□□□□ 0.24
TRIM39-201ENST00000376656 APLP1P51693 650 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 LDLRAP1Q5SW96 308 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 GJC2Q5T442 439 aaPredicted RBP16.54■□□□□ 0.24
TRIM39-201ENST00000376656 USP51Q70EK9 711 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 IGFN1Q86VF2 1251 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 SULF1Q8IWU6 871 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 PPHLN1Q8NEY8 458 aaKnown RBP16.54■□□□□ 0.24
TRIM39-201ENST00000376656 BPIFB6Q8NFQ5 453 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 SNX19Q92543 992 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 CCDC126Q96EE4 140 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 ZNF419Q96HQ0 510 aaPredicted RBP16.54■□□□□ 0.24
TRIM39-201ENST00000376656 SPATC1LQ9H0A9 340 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 HTR3EA5X5Y0 456 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 BBIP1A8MTZ0 92 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 TXNP10599 105 aaKnown RBP16.54■□□□□ 0.24
TRIM39-201ENST00000376656 RFC2P35250 354 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 BNIP2Q12982 314 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 CCNYL2Q5T2Q4 361 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 AGAP9Q5VTM2 703 aa16.54■□□□□ 0.24
TRIM39-201ENST00000376656 TBPL2Q6SJ96 375 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms