RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 FAM117BQ6P1L5 589 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 LAYNQ6UX15 382 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 GPRIN1Q7Z2K8 1008 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 ZNF354CQ86Y25 554 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 CCDC185Q8N715 623 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 SNX31Q8N9S9 440 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 HTR3CQ8WXA8 447 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 SPATA13Q96N96 652 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 LGMNQ99538 433 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 TDRD1Q9BXT4 1180 aaKnown RBP12.98□□□□□ -0.33
MSH5-204ENST00000375755 TASP1Q9H6P5 420 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 SLC30A1Q9Y6M5 507 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 TTC3P53804 2025 aa12.98□□□□□ -0.33
MSH5-204ENST00000375755 GOLGA8TH3BQL2 631 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 SDHDO14521 159 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 B4GALT3O60512 393 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 ATP6V1B2P21281 511 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 MATN1P21941 496 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 LRPAP1P30533 357 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 YAP1P46937 504 aaKnown RBP12.97□□□□□ -0.33
MSH5-204ENST00000375755 GLRBP48167 497 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TRIM16LQ309B1 348 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 SLC36A3Q495N2 470 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 PCYOX1LQ8NBM8 494 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 CYGBQ8WWM9 190 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 STARD8Q92502 1023 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 ADAM2Q99965 735 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 IL22Q9GZX6 179 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 MRPL40Q9NQ50 206 aaKnown RBP12.97□□□□□ -0.33
MSH5-204ENST00000375755 DTLQ9NZJ0 730 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TDRD15B5MCY1 1934 aaKnown RBP12.97□□□□□ -0.33
MSH5-204ENST00000375755 KPNA6O60684 536 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 SDC4P31431 198 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 HK2P52789 917 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 BCAT1P54687 386 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TIGD5Q53EQ6 642 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TMEM214Q6NUQ4 689 aaKnown RBP12.97□□□□□ -0.33
MSH5-204ENST00000375755 C14orf80Q86SX3 495 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TERB1Q8NA31 727 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 KDM1BQ8NB78 822 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 ZNF669Q96BR6 464 aaPredicted RBP12.97□□□□□ -0.33
MSH5-204ENST00000375755 TMEM209Q96SK2 561 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TBCBQ99426 244 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 PCDH10Q9P2E7 1040 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 SARDHQ9UL12 918 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 GIT1Q9Y2X7 761 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 CCNA2P20248 432 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 JAK1P23458 1154 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 MAP4P27816 1152 aaKnown RBP12.97□□□□□ -0.33
MSH5-204ENST00000375755 PSMB4P28070 264 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 POLR2IP36954 125 aaKnown RBP12.97□□□□□ -0.33
MSH5-204ENST00000375755 SEPT6Q14141 434 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 DEPDC1Q5TB30 811 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 CLEC20AQ6ZU45 233 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 CAMK1DQ8IU85 385 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TTC39CQ8N584 583 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 NAT9Q9BTE0 207 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 MED10Q9BTT4 135 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 NANOGQ9H9S0 305 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 SPAG4Q9NPE6 437 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 SACM1LQ9NTJ5 587 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 B3GNT3Q9Y2A9 372 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 TCAF1Q9Y4C2 921 aa12.97□□□□□ -0.33
MSH5-204ENST00000375755 SLCO1B7G3V0H7 640 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 WARSP23381 471 aaKnown RBP12.96□□□□□ -0.33
MSH5-204ENST00000375755 PNPLA4P41247 253 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 MBTPS1Q14703 1052 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 SPANXN3Q5MJ09 141 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 SYPL2Q5VXT5 272 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 BTLAQ7Z6A9 289 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 DHFR2Q86XF0 187 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 PELI3Q8N2H9 469 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 PACRGLQ8N7B6 248 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 FAM149B1Q96BN6 582 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 SLC39A3Q9BRY0 314 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 ATAD3AQ9NVI7 634 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 ARMC1Q9NVT9 282 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 NOD1Q9Y239 953 aa12.96□□□□□ -0.33
MSH5-204ENST00000375755 MDM4O15151 490 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 CLOCKO15516 846 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 KCNH1O95259 989 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 PABPC1P11940 636 aaKnown RBP12.96□□□□□ -0.34
MSH5-204ENST00000375755 ACLYP53396 1101 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 GRSF1Q12849 480 aaKnown RBP eCLIP12.96□□□□□ -0.34
MSH5-204ENST00000375755 DEFB115Q30KQ5 88 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 AGKQ53H12 422 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 LDLRAP1Q5SW96 308 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 INTS11Q5TA45 600 aaKnown RBP12.96□□□□□ -0.34
MSH5-204ENST00000375755 RTN4RL1Q86UN2 441 aaPredicted RBP12.96□□□□□ -0.34
MSH5-204ENST00000375755 FAM131BQ86XD5 332 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 DEFB106AQ8N104 65 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 OR2T34Q8NGX1 318 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 OR2T3Q8NH03 318 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 STON2Q8WXE9 905 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 RTP3Q9BQQ7 232 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 C1QTNF1Q9BXJ1 281 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 CREBZFQ9NS37 354 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 TMEM9Q9P0T7 183 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 DAPK2Q9UIK4 370 aa12.96□□□□□ -0.34
MSH5-204ENST00000375755 AURKCQ9UQB9 309 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms