RNA–Protein interactions for RNA: ENST00000375692.5

CLCNKA-202, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-202ENST00000375692 RBM12BQ8IXT5 1001 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 OR2T34Q8NGX1 318 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 OR2T3Q8NH03 318 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 DUS3LQ96G46 650 aaKnown RBP14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 SLC45A3Q96JT2 553 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 PLEKHG4BQ96PX9 1271 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 TCF12Q99081 682 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 VAT1Q99536 393 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 SLC25A23Q9BV35 468 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF711Q9Y462 761 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 TRAF6Q9Y4K3 522 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 PTGDR2Q9Y5Y4 395 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 COL1A2P08123 1366 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 ATE1O95260 518 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 CD4P01730 458 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 BMP2P12643 396 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 KCNC1P48547 511 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 TBCELQ5QJ74 424 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 C8orf82Q6P1X6 216 aaPredicted RBP14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 ERMP1Q7Z2K6 904 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 GPR180Q86V85 440 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 LZTR1Q8N653 840 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 RAET1EQ8TD07 263 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 ANKRD49Q8WVL7 239 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 KCTD13Q8WZ19 329 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 BRD8Q9H0E9 1235 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 SIK2Q9H0K1 926 aa14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 TIMM13Q9Y5L4 95 aaPredicted RBP14.17□□□□□ -0.14
CLCNKA-202ENST00000375692 MBLAC1A4D2B0 266 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 NME4O00746 187 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ALDOCP09972 364 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 CAPRIN1Q14444 709 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 MAP7D1Q3KQU3 841 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 NOTUMQ6P988 496 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 C2CD4AQ8NCU7 369 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 PPHLN1Q8NEY8 458 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 SH3RF2Q8TEC5 729 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 TMEM40Q8WWA1 233 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ZNF560Q96MR9 790 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 SMOQ99835 787 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 CFHR5Q9BXR6 569 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 PLGRKTQ9HBL7 147 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 MAP10Q9P2G4 905 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 TCAF1Q9Y4C2 921 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 TSC2P49815 1807 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 A0A087WXM4 84 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 A0A087X1B8 175 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 SH3PXD2BA1X283 911 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 RRN3P2A6NIE6 340 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 BOLA2-SMG1P6H3BVE0 249 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 NR5A2O00482 541 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ADAMTS4O75173 837 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ATP6V1G1O75348 118 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 GPR32O75388 356 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 TPP2P29144 1249 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 SLC5A3P53794 718 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 CDH13P55290 713 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 NUP107P57740 925 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ESRRGP62508 458 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 PFKPQ01813 784 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 KCNA10Q16322 511 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ARL13BQ3SXY8 428 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ZBED5Q49AG3 693 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 VPS26BQ4G0F5 336 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 INTS6LQ5JSJ4 861 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 FAM45BPQ6NSW5 357 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 NEPROQ6NW34 567 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 DHRS4L2Q6PKH6 230 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 LIMS2Q7Z4I7 341 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 LDB1Q86U70 411 aaPredicted RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ZBTB46Q86UZ6 589 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 ARRDC4Q8NCT1 418 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 FAM45AQ8TCE6 357 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 RNF34Q969K3 372 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 FBXL20Q96IG2 436 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 RHOBTB2Q9BYZ6 727 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 UPF3AQ9H1J1 476 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 EML4Q9HC35 981 aaKnown RBP14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 CRTAC1Q9NQ79 661 aa14.16□□□□□ -0.14
CLCNKA-202ENST00000375692 PPP6CO00743 305 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 SUPT7LO94864 414 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 ASGR1P07306 291 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 HSPA8P11142 646 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 CHRM3P20309 590 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 DNAJB1P25685 340 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 PMS2P3Q13401 168 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 SV2CQ496J9 727 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 LARP4Q71RC2 724 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 FAM35AQ86V20 835 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 OFCC1Q8IZS5 231 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 CYGBQ8WWM9 190 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 FAR2Q96K12 515 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 ADI1Q9BV57 179 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 GSTO2Q9H4Y5 243 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 SOX17Q9H6I2 414 aaPredicted RBP14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 ARMC1Q9NVT9 282 aa14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 PIN4Q9Y237 131 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 AAR2Q9Y312 384 aaKnown RBP14.15□□□□□ -0.14
CLCNKA-202ENST00000375692 RNF103-CHMP3A0A140T963 221 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms