RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ISCA2Q86U28 154 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 TMEM173Q86WV6 379 aaPredicted RBP17.1■□□□□ 0.33
RXRB-201ENST00000374680 EFHBQ8N7U6 833 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 SLC39A13Q96H72 371 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 TRIM62Q9BVG3 475 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 GKN1Q9NS71 199 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 RNF186Q9NXI6 227 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 UTP6Q9NYH9 597 aaKnown RBP17.1■□□□□ 0.33
RXRB-201ENST00000374680 SCML2Q9UQR0 700 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 TIMM22Q9Y584 194 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 NYNRINQ9P2P1 1898 aaKnown RBP17.1■□□□□ 0.33
RXRB-201ENST00000374680 LDB2O43679 373 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 SLC2A3P11169 496 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 GFAPP14136 432 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 RGRP47804 291 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 PRKAA2P54646 552 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 PRKD2Q9BZL6 878 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 MID1IP1Q9NPA3 183 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 PAPOLBQ9NRJ5 636 aaKnown RBP17.1■□□□□ 0.33
RXRB-201ENST00000374680 PSMD13Q9UNM6 376 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 SCN10AQ9Y5Y9 1956 aa17.1■□□□□ 0.33
RXRB-201ENST00000374680 TPST1O60507 370 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 TLR5O60602 858 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 CHRM3P20309 590 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 PRDX6P30041 224 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 LEPRP48357 1165 aaKnown RBP17.09■□□□□ 0.33
RXRB-201ENST00000374680 FCGRTP55899 365 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 YBX1P67809 324 aaKnown RBP17.09■□□□□ 0.33
RXRB-201ENST00000374680 UMODL1-AS1Q8N2C9 162 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 ATP6V0D2Q8N8Y2 350 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 SEMA4BQ9NPR2 832 aaPredicted RBP17.09■□□□□ 0.33
RXRB-201ENST00000374680 PCDHGC4Q9Y5F7 938 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 CCDC160A6NGH7 325 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 TRPC5OSA6NMA1 111 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 H3BMM5 538 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 CD3EAPO15446 510 aaKnown RBP17.09■□□□□ 0.33
RXRB-201ENST00000374680 RNASEH2AO75792 299 aaKnown RBP17.09■□□□□ 0.33
RXRB-201ENST00000374680 GLP2RO95838 553 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 LINC00032P0C843 101 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 GRIA2P42262 883 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 CASP2P42575 452 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 SH3BP2P78314 561 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 LINGO4Q6UY18 593 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 SLC24A5Q71RS6 500 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 IFNEQ86WN2 208 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 COLGALT2Q8IYK4 626 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 PGAM4Q8N0Y7 254 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 CALML6Q8TD86 181 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 PIF1Q9H611 641 aa17.09■□□□□ 0.33
RXRB-201ENST00000374680 PRDM5Q9NQX1 630 aaPredicted RBP17.09■□□□□ 0.33
RXRB-201ENST00000374680 TDRD15B5MCY1 1934 aaKnown RBP17.08■□□□□ 0.33
RXRB-201ENST00000374680 FBP2O00757 339 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 TYMPP19971 482 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 DNAJB2P25686 324 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 PFKPQ01813 784 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 ZNF33AQ06730 810 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 OR4D1Q15615 310 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 AFMIDQ63HM1 303 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 NADSYN1Q6IA69 706 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 SATL1Q86VE3 508 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 PPWD1Q96BP3 646 aaKnown RBP17.08■□□□□ 0.33
RXRB-201ENST00000374680 CNDP1Q96KN2 507 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 NSMCE3Q96MG7 304 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 HBEGFQ99075 208 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 FBXO44Q9H4M3 255 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 GALPQ9UBC7 116 aa17.08■□□□□ 0.33
RXRB-201ENST00000374680 SLCO1B7G3V0H7 640 aa17.08■□□□□ 0.32
RXRB-201ENST00000374680 NR5A2O00482 541 aa17.08■□□□□ 0.32
RXRB-201ENST00000374680 ATXN1LP0C7T5 689 aaKnown RBP17.08■□□□□ 0.32
RXRB-201ENST00000374680 CLCN5P51795 746 aa17.08■□□□□ 0.32
RXRB-201ENST00000374680 CAPRIN1Q14444 709 aaKnown RBP17.08■□□□□ 0.32
RXRB-201ENST00000374680 NFE2Q16621 373 aaPredicted RBP17.08■□□□□ 0.32
RXRB-201ENST00000374680 ZNF483Q8TF39 744 aaPredicted RBP17.08■□□□□ 0.32
RXRB-201ENST00000374680 NR1H4Q96RI1 486 aaPredicted RBP17.08■□□□□ 0.32
RXRB-201ENST00000374680 GSTO2Q9H4Y5 243 aa17.08■□□□□ 0.32
RXRB-201ENST00000374680 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.08■□□□□ 0.32
RXRB-201ENST00000374680 UBAP1Q9NZ09 502 aa17.08■□□□□ 0.32
RXRB-201ENST00000374680 EGFL7Q9UHF1 273 aa17.08■□□□□ 0.32
RXRB-201ENST00000374680 A0A1B0GTW7 788 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 TMEM88BA6NKF7 163 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 ENPP3O14638 875 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 NPHS1O60500 1241 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 GJB5O95377 273 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 PLIN5Q00G26 463 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 GRB7Q14451 532 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 VPS26BQ4G0F5 336 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 UNC50Q53HI1 259 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 DENND1CQ8IV53 801 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 OR4K2Q8NGD2 314 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 DIS3LQ8TF46 1054 aaKnown RBP17.07■□□□□ 0.32
RXRB-201ENST00000374680 LRTOMTQ8WZ04 291 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 LPGAT1Q92604 370 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 BTN2A3PQ96KV6 586 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 ZNF385DQ9H6B1 395 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 SMPD4Q9NXE4 827 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 SNX13Q9Y5W8 968 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 PRORSD1PA6NEY8 169 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 CBX4O00257 560 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 ADAM12O43184 909 aa17.07■□□□□ 0.32
RXRB-201ENST00000374680 RBP1P09455 135 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms