RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 STK40Q8N2I9 435 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FBXO39Q8N4B4 442 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 BORCS5Q969J3 196 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 C12orf42Q96LP6 360 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 DCUN1D5Q9BTE7 237 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 GPN1Q9HCN4 374 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 GDF3Q9NR23 364 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SLC2A4RGQ9NR83 387 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ASB3Q9Y575 518 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 H3BN98 237 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FPGTO14772 594 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PMPCBO75439 489 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 OR6A2O95222 327 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 KLF8O95600 359 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PCSK2P16519 638 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ITGB6P18564 788 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 RAB15P59190 212 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 C1QBPQ07021 282 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 MAPK11Q15759 364 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CYP2A13Q16696 494 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 XKR4Q5GH76 650 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FAAH2Q6GMR7 532 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 GALNT18Q6P9A2 607 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ZFP28Q8NHY6 868 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CAPSLQ8WWF8 208 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 USP7Q93009 1102 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 RFT1Q96AA3 541 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PTCD3Q96EY7 689 aaKnown RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 VCPIP1Q96JH7 1222 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 B3GALT6Q96L58 329 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 PNKPQ96T60 521 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 C2orf49Q9BVC5 232 aaPredicted RBP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SMURF2Q9HAU4 748 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 RNPEPL1Q9HAU8 725 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 A0A0X1KG70 313 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 TEX46H3BTG2 121 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ACKR2O00590 384 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FGRP09769 529 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 DDX6P26196 483 aaKnown RBP eCLIP6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SOX11P35716 441 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CAPGP40121 348 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ID4P47928 161 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 KCNJ1P48048 391 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 NR2C2P49116 596 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 GPR15P49685 360 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CAP1Q01518 475 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SULT2A1Q06520 285 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SDHAF4Q5VUM1 108 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 CHST9Q7L1S5 443 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 TTC7BQ86TV6 843 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF276Q8N554 614 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF614Q8N883 585 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 FEM1CQ96JP0 617 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SHCBP1LQ9BZQ2 653 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SLC39A8Q9C0K1 460 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 EURLQ9NYK6 297 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 TRPC4Q9UBN4 977 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 TRIM10Q9UDY6 481 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 ZDHHC9Q9Y397 364 aa6.32□□□□□ -1.4
PTPN3-202ENST00000374541 SPATA31C2B4DYI2 1134 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 NRP1O14786 923 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 SMNDC1O75940 238 aaKnown RBP eCLIP6.31□□□□□ -1.4
PTPN3-202ENST00000374541 WFS1O76024 890 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 EPN2O95208 641 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 ANXA5P08758 320 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 ATP4AP20648 1035 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 MYL9P24844 172 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 CYP24A1Q07973 514 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 NR1D2Q14995 579 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 PON2Q15165 354 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 TNFAIP8L3Q5GJ75 292 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 RAET1GQ6H3X3 334 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 BHLHB9Q6PI77 547 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 C4orf19Q8IY42 314 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 ZNF655Q8N720 491 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-202ENST00000374541 THAP2Q9H0W7 228 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 HPS4Q9NQG7 708 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 MUTYHQ9UIF7 546 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 RAB21Q9UL25 225 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 TMEM221A6NGB7 291 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 RBAK-RBAKDNI3L0D1 243 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 M0R296 226 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 RIPK2O43353 540 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 SQLEQ14534 574 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 N4BP2L1Q5TBK1 243 aaPredicted RBP6.31□□□□□ -1.4
PTPN3-202ENST00000374541 FAM92BQ6ZTR7 304 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 CBWD2Q8IUF1 395 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 TRPV3Q8NET8 790 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 TSPAN14Q8NG11 270 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 FAM81AQ8TBF8 368 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 COX4I2Q96KJ9 171 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 RNF145Q96MT1 663 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 CLCC1Q96S66 551 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 OSBPL11Q9BXB4 747 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 PRRG4Q9BZD6 226 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 LHX5Q9H2C1 402 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 ERGIC3Q9Y282 383 aa6.31□□□□□ -1.4
PTPN3-202ENST00000374541 COQ6Q9Y2Z9 468 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms