RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 FFAR3O14843 346 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 GIPC1O14908 333 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 STX7O15400 261 aaKnown RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 GPR42O15529 346 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 ZNF623O75123 536 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 NIPSNAP2O75323 286 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SEC24AO95486 1093 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 TPBGLP0DKB5 382 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SLC11A2P49281 568 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 CDKN2DP55273 166 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 RHOAP61586 193 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 CDK18Q07002 472 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 RBBP7Q16576 425 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 MAP3K21Q5TCX8 1036 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 TMEM135Q86UB9 458 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 PGBD5Q8N414 524 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 EGFL8Q99944 293 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 RHOJQ9H4E5 214 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 MTG2Q9H4K7 406 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 NOL6Q9H6R4 1146 aaKnown RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 PLXNB2O15031 1838 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SLC38A8A6NNN8 435 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 ARVCFO00192 962 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 TRIM24O15164 1050 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 DHRS4L1P0CG22 281 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SLC2A3P11169 496 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 CSF2RAP15509 400 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 PSMC3P17980 439 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 CCNCP24863 283 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 VEGFBP49765 207 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 C18orf21Q32NC0 220 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 HECTD2Q5U5R9 776 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 PTGR2Q8N8N7 351 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 ING5Q8WYH8 240 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SKA1Q96BD8 255 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 NAF1Q96HR8 494 aaKnown RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 BTN2A3PQ96KV6 586 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SLC9A7Q96T83 725 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SORT1Q99523 831 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 ENTPD7Q9NQZ7 604 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 RCOR3Q9P2K3 495 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SUN2Q9UH99 717 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 EGFL7Q9UHF1 273 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 FKBPLQ9UIM3 349 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 CDYLQ9Y232 598 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 VWA7Q9Y334 891 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 A0A1W2PRU2 124 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 TNFRSF10BO14763 440 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 MAP3K7O43318 606 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 COCHO43405 550 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 BAIAP3O94812 1187 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 ATF6P18850 670 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 GABRR2P28476 465 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 RPL14P50914 215 aaKnown RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 DEFB103AP81534 67 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 PM20D1Q6GTS8 502 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 C4orf22Q6V702 233 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 CENPLQ8N0S6 344 aaPredicted RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 POLR1EQ9GZS1 481 aaKnown RBP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 SMOC2Q9H3U7 446 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 TNFRSF12AQ9NP84 129 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.84□□□□□ -0.67
CXCL12-203ENST00000374429 NMRK1Q9NWW6 199 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 NDE1Q9NXR1 346 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 ZNHIT2Q9UHR6 403 aa10.84□□□□□ -0.67
CXCL12-203ENST00000374429 PLXNA1Q9UIW2 1896 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 MYOCOSA0A1B0GUC4 107 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 NR5A2O00482 541 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 PER2O15055 1255 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 SEC24DO94855 1032 aaPredicted RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 PSMG1O95456 288 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 KLKB1P03952 638 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 MLNP12872 115 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 SYN1P17600 705 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 MAGEA3P43357 314 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 AGTR2P50052 363 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CAPRIN1Q14444 709 aaKnown RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 NRF1Q16656 503 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CTC1Q2NKJ3 1217 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 HECTD3Q5T447 861 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 TMEM154Q6P9G4 183 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 TMPRSS6Q8IU80 811 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 SLC22A17Q8WUG5 538 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 GCNAQ96QF7 691 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 PANX3Q96QZ0 392 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 COPS7BQ9H9Q2 264 aaPredicted RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CD274Q9NZQ7 290 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 GALPQ9UBC7 116 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 UBA2Q9UBT2 640 aaPredicted RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 Q9Y3F1 56 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 WDR90Q96KV7 1748 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 PRR23AA6NEV1 266 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 LSM1O15116 133 aaKnown RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 CD3EAPO15446 510 aaKnown RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 STK19P49842 368 aaPredicted RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 SEMA3BQ13214 749 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 NADSYN1Q6IA69 706 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 TIGD7Q6NT04 549 aaPredicted RBP10.83□□□□□ -0.68
CXCL12-203ENST00000374429 PAQR3Q6TCH7 311 aa10.83□□□□□ -0.68
CXCL12-203ENST00000374429 BBS5Q8N3I7 341 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms