RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 MTRRQ9UBK8 725 aa16.02■□□□□ 0.16
CNKSR1-202ENST00000374253 PITPNM1O00562 1244 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 IPO13O94829 963 aaKnown RBP16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 RHOCP08134 193 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 SULT2A1Q06520 285 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 KLC3Q6P597 504 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 EFHBQ8N7U6 833 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 OR4K2Q8NGD2 314 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 FATE1Q969F0 183 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 RCN3Q96D15 328 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 FEM1CQ96JP0 617 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 UBXN10Q96LJ8 280 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 TTLL2Q9BWV7 592 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 MUC3BQ9H195 1237 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 TRPC7Q9HCX4 862 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 AGO1Q9UL18 857 aaKnown RBP16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 ARHGAP26Q9UNA1 814 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 FAM50BQ9Y247 325 aa16.02■□□□□ 0.15
CNKSR1-202ENST00000374253 ATP6AP2A0A1C7CYW4 349 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 PPP6CO00743 305 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 GPR39O43194 453 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 ATP6AP2O75787 350 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 FGF1P05230 155 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 ANPEPP15144 967 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 PMLP29590 882 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 POLD2P49005 469 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 C1QTNF8P60827 252 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 TIAL1Q01085 375 aaKnown RBP eCLIP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 PFKPQ01813 784 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 RNF219Q5W0B1 726 aaPredicted RBP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 MYLK4Q86YV6 388 aaPredicted RBP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 LPCAT1Q8NF37 534 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 USP13Q92995 863 aaPredicted RBP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 IGSF21Q96ID5 467 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF333Q96JL9 665 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 TMEM175Q9BSA9 504 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 PRRC2BQ5JSZ5 2229 aaKnown RBP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 HOXA2O43364 376 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 SUPT7LO94864 414 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 SIX3O95343 332 aaPredicted RBP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 HLA-DPA1P20036 260 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 PIWIL4Q7Z3Z4 852 aaKnown RBP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 ISCA2Q86U28 154 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 CUZD1Q86UP6 607 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 MDGA1Q8NFP4 955 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 OR4L1Q8NH43 312 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 BRSK1Q8TDC3 778 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 CWH43Q9H720 699 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 CATSPERZQ9NTU4 200 aa16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 COPG1Q9Y678 874 aaKnown RBP16.01■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 F8W8V4 182 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 STX16-NPEPL1H3BU86 382 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 SDHDO14521 159 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 UBFD1O14562 309 aaKnown RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 FKTNO75072 461 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 RPP40O75818 363 aaKnown RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 FMO4P31512 558 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 TUFMP49411 452 aaKnown RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 VEGFBP49765 207 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 KPNA1P52294 538 aaPredicted RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 PRKAA2P54646 552 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 CDH4P55283 916 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 PKNOX1P55347 436 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 BTKQ06187 659 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 ZNF177Q13360 481 aaPredicted RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 CCNIQ14094 377 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 LCA5Q86VQ0 697 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 ACTRT2Q8TDY3 377 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 TSPAN17Q96FV3 270 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 CDKN2AIPNLQ96HQ2 116 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 TRIB3Q96RU7 358 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 MGME1Q9BQP7 344 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 MAGEH1Q9H213 219 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 TRPM5Q9NZQ8 1165 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 SEPT3Q9UH03 358 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 H3BMM5 538 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 NDST3O95803 873 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 ENO3P13929 434 aaPredicted RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 CA8P35219 290 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 PPARGP37231 505 aaPredicted RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 KPNA2P52292 529 aaKnown RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 SMARCB1Q12824 385 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 METTL21CQ5VZV1 264 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 GLT6D1Q7Z4J2 308 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 NPAS2Q99743 824 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 RNF208Q9H0X6 261 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 SCUBE2Q9NQ36 999 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 TSR3Q9UJK0 312 aaKnown RBP16■□□□□ 0.15
CNKSR1-202ENST00000374253 POMPQ9Y244 141 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 PTGDR2Q9Y5Y4 395 aa16■□□□□ 0.15
CNKSR1-202ENST00000374253 CCDC189A1A4V9 331 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 UBXN8O00124 270 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 INSIG1O15503 277 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 NPHS1O60500 1241 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 MZF1P28698 734 aaPredicted RBP15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 ACAP2Q15057 778 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 CYTH1Q15438 398 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 OR4D1Q15615 310 aa15.99■□□□□ 0.15
CNKSR1-202ENST00000374253 GK5Q6ZS86 529 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms