RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 TRAPPC9Q96Q05 1148 aa12.53□□□□□ -0.4
A1CF-203ENST00000373995 SPON2Q9BUD6 331 aa12.53□□□□□ -0.4
A1CF-203ENST00000373995 AP1M1Q9BXS5 423 aa12.53□□□□□ -0.4
A1CF-203ENST00000373995 HS3ST2Q9Y278 367 aa12.53□□□□□ -0.4
A1CF-203ENST00000373995 C15orf41Q9Y2V0 281 aa12.53□□□□□ -0.4
A1CF-203ENST00000373995 NYNRINQ9P2P1 1898 aaKnown RBP12.52□□□□□ -0.4
A1CF-203ENST00000373995 C17orf113A0A1B0GUU1 675 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 CBX4O00257 560 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 DFFAO00273 331 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 PRAMEF11O60813 436 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 PEX11BO96011 259 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 ATXN8OSP0DMR3 200 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 CHRNB1P11230 501 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 MX2P20592 715 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 TARSP26639 723 aaKnown RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 ADCY8P40145 1251 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 CTSOP43234 321 aaPredicted RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 PDK1Q15118 436 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 IL31Q6EBC2 164 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 SIGIRRQ6IA17 410 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 HIBCHQ6NVY1 386 aaPredicted RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 SORCS1Q8WY21 1168 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 FATE1Q969F0 183 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 HAUS1Q96CS2 278 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 MYO19Q96H55 970 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 CIPCQ9C0C6 399 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 LTB4R2Q9NPC1 389 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 IPO11Q9UI26 975 aaKnown RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 MRPS17Q9Y2R5 130 aaKnown RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 MTF2Q9Y483 593 aaPredicted RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 MUC22E2RYF6 1773 aaPredicted RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 J3KR12 359 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 KMOO15229 486 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 ASLP04424 464 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 ATP5BP06576 529 aaKnown RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 ALADP13716 330 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 IL32P24001 234 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 ECT2LQ008S8 904 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 OTUD4Q01804 1114 aaKnown RBP12.52□□□□□ -0.41
A1CF-203ENST00000373995 ZNF33AQ06730 810 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 ENPP2Q13822 863 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 MAPRE2Q15555 327 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 FBXO43Q4G163 708 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 IGSF11Q5DX21 431 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 TRIM67Q6ZTA4 783 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 ATPAF2Q8N5M1 289 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 TTC13Q8NBP0 860 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 MED30Q96HR3 178 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 TBC1D17Q9HA65 648 aa12.52□□□□□ -0.41
A1CF-203ENST00000373995 ZSCAN5CA6NGD5 496 aaPredicted RBP12.51□□□□□ -0.41
A1CF-203ENST00000373995 PGRMC1O00264 195 aaKnown RBP12.51□□□□□ -0.41
A1CF-203ENST00000373995 SHOX2O60902 331 aaPredicted RBP12.51□□□□□ -0.41
A1CF-203ENST00000373995 DNAJC6O75061 913 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 SLC34A2O95436 690 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 MT-CO1P00395 513 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 HNRNPLP14866 589 aaKnown RBP eCLIP12.51□□□□□ -0.411e-6■■■□□ 15
A1CF-203ENST00000373995 RPS2P15880 293 aaKnown RBP12.51□□□□□ -0.41
A1CF-203ENST00000373995 ZNF3P17036 446 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 CTRB1P17538 263 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 KRT4P19013 534 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 CBX5P45973 191 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 IL10RBQ08334 325 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 FAPQ12884 760 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 XRCC4Q13426 336 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 PRKD1Q15139 912 aaPredicted RBP12.51□□□□□ -0.41
A1CF-203ENST00000373995 DEPDC1Q5TB30 811 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 CTRB2Q6GPI1 263 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 RETSATQ6NUM9 610 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 CADM3Q8N126 398 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 LSMEM1Q8N8F7 131 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 KDM1BQ8NB78 822 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 SLC35B2Q8TB61 432 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 FERD3LQ96RJ6 166 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 LGMNQ99538 433 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 TUBA1CQ9BQE3 449 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 OSBPL6Q9BZF3 934 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 FOXQ1Q9C009 403 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 THAP10Q9P2Z0 257 aaPredicted RBP12.51□□□□□ -0.41
A1CF-203ENST00000373995 CRNNQ9UBG3 495 aaPredicted RBP12.51□□□□□ -0.41
A1CF-203ENST00000373995 HPCAL4Q9UM19 191 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 ZDBF2Q9HCK1 2354 aa12.51□□□□□ -0.41
A1CF-203ENST00000373995 OR5K4A6NMS3 321 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 HDAC3O15379 428 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 SULT1B1O43704 296 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 OR5F1O95221 314 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 SRPRAP08240 638 aaKnown RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 SERPINH1P50454 418 aaKnown RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 LONRF2Q1L5Z9 754 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 DGKKQ5KSL6 1271 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 ABRAXAS1Q6UWZ7 409 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 LINGO4Q6UY18 593 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 ADAT2Q7Z6V5 191 aaKnown RBP12.5□□□□□ -0.41
A1CF-203ENST00000373995 CCDC13Q8IYE1 715 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 SYNPOQ8N3V7 929 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 BBOF1Q8ND07 529 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 CYB5D2Q8WUJ1 264 aa12.5□□□□□ -0.41
A1CF-203ENST00000373995 ZNF419Q96HQ0 510 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms