RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 MPLP40238 635 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 CCR5P51681 352 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 CDK18Q07002 472 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 QPCTQ16769 361 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 P3H1Q32P28 736 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 SPDYCQ5MJ68 293 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 KIAA1161Q6NSJ0 714 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 KDM7AQ6ZMT4 941 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 SLC25A41Q8N5S1 370 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 CCDC89Q8N998 374 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 ATL2Q8NHH9 583 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 GRK7Q8WTQ7 553 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 SLCO2A1Q92959 643 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 RMDN1Q96DB5 314 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 IFT43Q96FT9 208 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 APOL2Q9BQE5 337 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 FICDQ9BVA6 458 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 SEMA4AQ9H3S1 761 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 PILRBQ9UKJ0 227 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 DRG1Q9Y295 367 aaKnown RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 A0A1W2PPC4 97 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 CAPN8A6NHC0 703 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 BHMG1C9JSJ3 638 aaPredicted RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 ZNF189O75820 626 aaPredicted RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 ATXN1LP0C7T5 689 aaKnown RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 C6P13671 934 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 H2AFXP16104 143 aaPredicted RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 GM2AP17900 193 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 MCM3P25205 808 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 VIPR1P32241 457 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 HNF1BP35680 557 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 GRIA4P48058 902 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 LIG3P49916 1009 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 GEMP55040 296 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 POLR2LP62875 67 aaKnown RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 MPP3Q13368 585 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 SPARCL1Q14515 664 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 TRIP13Q15645 432 aaPredicted RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 CNGA3Q16281 694 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 WDR45BQ5MNZ6 344 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 GSTA5Q7RTV2 222 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 IFT20Q8IY31 132 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 DCLK2Q8N568 766 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 FEM1CQ96JP0 617 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 SLC6A18Q96N87 628 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 MCCC1Q96RQ3 725 aaPredicted RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 GDF3Q9NR23 364 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 NCDNQ9UBB6 729 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 FEZ2Q9UHY8 353 aaPredicted RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 GMEB2Q9UKD1 530 aa18.59■□□□□ 0.57
CDX4-201ENST00000373514 UTP11Q9Y3A2 253 aaKnown RBP18.59■□□□□ 0.57
CDX4-201ENST00000373514 A0A1W2PQ67 120 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 ESYT3A0FGR9 886 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 RAD51BO15315 384 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 SLC31A1O15431 190 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 USP12O75317 370 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 ANXA9O76027 345 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 STIP1P31948 543 aaKnown RBP18.58■□□□□ 0.56
CDX4-201ENST00000373514 RPL22P35268 128 aaKnown RBP18.58■□□□□ 0.56
CDX4-201ENST00000373514 SUOXP51687 545 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 RPS21P63220 83 aaKnown RBP18.58■□□□□ 0.56
CDX4-201ENST00000373514 PEAR1Q5VY43 1037 aaPredicted RBP18.58■□□□□ 0.56
CDX4-201ENST00000373514 DENND2CQ68D51 928 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 TCEAL6Q6IPX3 200 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 NEK5Q6P3R8 708 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 FBXO38Q6PIJ6 1188 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 LIPIQ6XZB0 460 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 USP45Q70EL2 814 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 C1orf216Q8TAB5 229 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 DNASE2BQ8WZ79 361 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 TCEAL3Q969E4 200 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 SCRN2Q96FV2 425 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 LOXL4Q96JB6 756 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 ERP44Q9BS26 406 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 FSD1LQ9BXM9 530 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 RAB17Q9H0T7 212 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 FSCN3Q9NQT6 498 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 VPS45Q9NRW7 570 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 PPIL1Q9Y3C6 166 aa18.58■□□□□ 0.56
CDX4-201ENST00000373514 LRP4O75096 1905 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 ANKRD66B4E2M5 251 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 NDST3O95803 873 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 GAS8O95995 478 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 AGTP01019 485 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 ELFN1P0C7U0 828 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 CYP2A6P11509 494 aaPredicted RBP18.57■□□□□ 0.56
CDX4-201ENST00000373514 CD27P26842 260 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 VPS41P49754 854 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 LMNB2Q03252 620 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 SPEM2Q0P670 501 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 BRD3Q15059 726 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 PPP1R7Q15435 360 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 PARP6Q2NL67 630 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 SETMARQ53H47 684 aaPredicted RBP18.57■□□□□ 0.56
CDX4-201ENST00000373514 SIRPB2Q5JXA9 342 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 LRRC66Q68CR7 880 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 CRTC1Q6UUV9 634 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 SYT12Q8IV01 421 aa18.57■□□□□ 0.56
CDX4-201ENST00000373514 ARGLU1Q9NWB6 273 aaPredicted RBP18.57■□□□□ 0.56
CDX4-201ENST00000373514 SPO11Q9Y5K1 396 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms