RNA–Protein interactions for RNA: ENST00000373253.7

NCDN-203, Transcript of neurochondrin, humanhuman

TSL 1 (best) BASIC

Gene NCDN, Length 3,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-203ENST00000373253 CERS4Q9HA82 394 aa13.24□□□□□ -0.29
NCDN-203ENST00000373253 SNX13Q9Y5W8 968 aa13.24□□□□□ -0.29
NCDN-203ENST00000373253 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
NCDN-203ENST00000373253 AP3B1O00203 1094 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 ANGPT2O15123 496 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 PFDN6O15212 129 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 S100BP04271 92 aaPredicted RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 KCNA5P22460 613 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 MC4RP32245 332 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 POU4F1Q01851 419 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 IKBKEQ14164 716 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 ARHGEF6Q15052 776 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 XKR4Q5GH76 650 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 TMCO4Q5TGY1 634 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 BNC2Q6ZN30 1099 aaPredicted RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 SPPL2BQ8TCT7 592 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 ANKRD49Q8WVL7 239 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 CNBD2Q96M20 576 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 VCX3BQ9H321 246 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.23□□□□□ -0.29
NCDN-203ENST00000373253 ATG2BQ96BY7 2078 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 AKAP10O43572 662 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 OR1I1O60431 355 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 ACSL4O60488 711 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 EOMESO95936 686 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 DHRS4L1P0CG22 281 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 THRAP10827 490 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 TYMPP19971 482 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 ARRB2P32121 409 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 RANBP1P43487 201 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 TUFMP49411 452 aaKnown RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 AIF1P55008 147 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 TSNQ15631 228 aaKnown RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 ASRGL1Q7L266 308 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 CUZD1Q86UP6 607 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 FBXO39Q8N4B4 442 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 ZNF398Q8TD17 642 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.23□□□□□ -0.29
NCDN-203ENST00000373253 EML4Q9HC35 981 aaKnown RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 EIF2B3Q9NR50 452 aaKnown RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 EPS15L1Q9UBC2 864 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 CD84Q9UIB8 345 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 RAP2CQ9Y3L5 183 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 RAI2Q9Y5P3 530 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 C1orf232A0A0U1RR37 186 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 MZF1P28698 734 aaPredicted RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 CRABP2P29373 138 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 PBLDP30039 288 aaPredicted RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 CAPRIN1Q14444 709 aaKnown RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 CBX2Q14781 532 aaPredicted RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 PM20D1Q6GTS8 502 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 PAQR3Q6TCH7 311 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 BHLHE22Q8NFJ8 381 aaPredicted RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 DNAJB14Q8TBM8 379 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 MRPS31Q92665 395 aaKnown RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 KCNN1Q92952 543 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 NT5C3BQ969T7 300 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 EME1Q96AY2 570 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 ZNF419Q96HQ0 510 aaPredicted RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 NSUN5Q96P11 429 aaKnown RBP13.23□□□□□ -0.29
NCDN-203ENST00000373253 PCDHAC1Q9H158 963 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 WDR41Q9HAD4 459 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 APPL1Q9UKG1 709 aa13.23□□□□□ -0.29
NCDN-203ENST00000373253 NPEPPSL1A6NEC2 478 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 HNRNPCL1O60812 293 aaKnown RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 CRTAMO95727 393 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 ATP5F1P24539 256 aaPredicted RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 RECQLP46063 649 aaPredicted RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 CDK7P50613 346 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 CCDC15Q0P6D6 951 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 BOP1Q14137 746 aaKnown RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 ARHGEF7Q14155 803 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 DDX53Q86TM3 631 aaKnown RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 CEP70Q8NHQ1 597 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 ZNF570Q96NI8 536 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 PRKD2Q9BZL6 878 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.29
NCDN-203ENST00000373253 EFCAB1Q9HAE3 211 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 CPQQ9Y646 472 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 TGDSO95455 350 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 CHEK2O96017 543 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 SKIV2L2P42285 1042 aaKnown RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 RGRP47804 291 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 SLC18A1P54219 525 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 RAB41Q5JT25 222 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 WASHC2DQ5SRD0 308 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 AMIGO2Q86SJ2 522 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 NPAS4Q8IUM7 802 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 ZNF483Q8TF39 744 aaPredicted RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 PANX3Q96QZ0 392 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 TSC22D3Q99576 134 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 FAM124BQ9H5Z6 455 aaPredicted RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 SUN2Q9UH99 717 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 PCDHB12Q9Y5F1 795 aa13.22□□□□□ -0.29
NCDN-203ENST00000373253 BRCA1P38398 1863 aaKnown RBP13.22□□□□□ -0.29
NCDN-203ENST00000373253 RNF103-CHMP3A0A140T963 221 aa13.21□□□□□ -0.29
NCDN-203ENST00000373253 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
NCDN-203ENST00000373253 MUSKO15146 869 aa13.21□□□□□ -0.29
NCDN-203ENST00000373253 CCNT2O60583 730 aaKnown RBP13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms