RNA–Protein interactions for RNA: ENST00000372621.8

CTPS1-202, Transcript of CTP synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-202ENST00000372621 ARHGAP22Q7Z5H3 698 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 TADA1Q96BN2 335 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 HIC2Q96JB3 615 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 AP5M1Q9H0R1 490 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 VPS45Q9NRW7 570 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 POLR3BQ9NW08 1133 aaPredicted RBP12.79□□□□□ -0.36
CTPS1-202ENST00000372621 CROTQ9UKG9 612 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 SCN10AQ9Y5Y9 1956 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 GPC4O75487 556 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 ARSDP51689 593 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 ADRM1Q16186 407 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 FSCN1Q16658 493 aaKnown RBP12.79□□□□□ -0.36
CTPS1-202ENST00000372621 GPR158Q5T848 1215 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 AMIGO2Q86SJ2 522 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 GPATCH1Q9BRR8 931 aaKnown RBP12.79□□□□□ -0.36
CTPS1-202ENST00000372621 ALG9Q9H6U8 611 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 SPON1Q9HCB6 807 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 FBRSL1Q9HCM7 1045 aaKnown RBP12.79□□□□□ -0.36
CTPS1-202ENST00000372621 NUDT5Q9UKK9 219 aa12.79□□□□□ -0.36
CTPS1-202ENST00000372621 PLXNA3P51805 1871 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 M0QZ92 97 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 CD86P42081 329 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 RENBPP51606 427 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 TIAL1Q01085 375 aaKnown RBP eCLIP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 TNK2Q07912 1038 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 RETREG3Q86VR2 466 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 GABPB2Q8TAK5 448 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 PTERQ96BW5 349 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 ROPN1LQ96C74 230 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 C19orf60Q96EN9 201 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 PRDM5Q9NQX1 630 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 ARMC1Q9NVT9 282 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 MARCH4Q9P2E8 410 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 ATXN10Q9UBB4 475 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 DSEQ9UL01 958 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 CNOT6Q9ULM6 557 aaKnown RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 CEPT1Q9Y6K0 416 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 J3KR12 359 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 MOCS2O96007 188 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 MAXP61244 160 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 HERVK_113P63132 956 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 SLC10A7Q0GE19 358 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 MAPRE1Q15691 268 aaKnown RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 CYP2R1Q6VVX0 501 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 LDB1Q86U70 411 aaPredicted RBP12.78□□□□□ -0.36
CTPS1-202ENST00000372621 RSPH1Q8WYR4 309 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 ERVK-6Q9BXR3 956 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 ZNF408Q9H9D4 720 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 NT5MQ9NPB1 228 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 HSFX1Q9UBD0 423 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 SNX13Q9Y5W8 968 aa12.78□□□□□ -0.36
CTPS1-202ENST00000372621 ATP6AP2A0A1C7CYW4 349 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 ATP6AP2O75787 350 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 SRP72O76094 671 aaKnown RBP12.77□□□□□ -0.36
CTPS1-202ENST00000372621 POMCP01189 267 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 IGHA2P01877 340 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 NDST2P52849 883 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 SH3BP2P78314 561 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 OVOS1Q6IE37 1185 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 PIM3Q86V86 326 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 TEX26Q8N6G2 289 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 ANKFN1Q8N957 763 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 HASPINQ8TF76 798 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 HDAC10Q969S8 669 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 HMCESQ96FZ2 354 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 SLC39A13Q96H72 371 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 SLC39A3Q9BRY0 314 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 AGO3Q9H9G7 860 aaKnown RBP12.77□□□□□ -0.36
CTPS1-202ENST00000372621 OLAHQ9NV23 265 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 DUS2Q9NX74 493 aaKnown RBP12.77□□□□□ -0.36
CTPS1-202ENST00000372621 MAP10Q9P2G4 905 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 GMPR2Q9P2T1 348 aaKnown RBP12.77□□□□□ -0.36
CTPS1-202ENST00000372621 ABCD2Q9UBJ2 740 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 DNAJC15Q9Y5T4 150 aa12.77□□□□□ -0.36
CTPS1-202ENST00000372621 ARHGEF37A1IGU5 675 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 CCL22O00626 93 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 LDB2O43679 373 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ZNF623O75123 536 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 SUPT7LO94864 414 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 H6PDO95479 791 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 FGF4P08620 206 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ATXN1LP0C7T5 689 aaKnown RBP12.77□□□□□ -0.37
CTPS1-202ENST00000372621 HAPLN1P10915 354 aaPredicted RBP12.77□□□□□ -0.37
CTPS1-202ENST00000372621 BMP2P12643 396 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 CD1DP15813 335 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 ZNF23P17027 643 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 TSPAN8P19075 237 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 FDXRP22570 491 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 FGFR3P22607 806 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 SLC5A2P31639 672 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 SLC7A2P52569 658 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 USP46P62068 366 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 DSC2Q02487 901 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 MGAT3Q09327 533 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 NHSL2Q5HYW2 709 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 PHYKPLQ8IUZ5 450 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 CLYBLQ8N0X4 340 aa12.77□□□□□ -0.37
CTPS1-202ENST00000372621 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms