RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 OGNP20774 298 aaKnown RBP25.05■■□□□ 1.6
CTSA-203ENST00000372459 PRKAA2P54646 552 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 LMAN2Q12907 356 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 CLNKQ7Z7G1 428 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 SDCCAG8Q86SQ7 713 aaPredicted RBP25.05■■□□□ 1.6
CTSA-203ENST00000372459 CMTM8Q8IZV2 173 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 SKA1Q96BD8 255 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 OLFM1Q99784 485 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 CORO1CQ9ULV4 474 aaPredicted RBP25.05■■□□□ 1.6
CTSA-203ENST00000372459 HELZP42694 1942 aaKnown RBP25.05■■□□□ 1.6
CTSA-203ENST00000372459 TMEM114B3SHH9 223 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 C5orf67F2Z3F1 127 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 MT-CO1P00395 513 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 SERPINB3P29508 390 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 HOXA9P31269 272 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 AQP5P55064 265 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 AP1S1P61966 158 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 SCG3Q8WXD2 468 aaKnown RBP25.05■■□□□ 1.6
CTSA-203ENST00000372459 TCEAL4Q96EI5 215 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 GPR78Q96P69 363 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 SORT1Q99523 831 aa25.05■■□□□ 1.6
CTSA-203ENST00000372459 ANKRD36A6QL64 1941 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 PSMA3P25788 255 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 DLG1Q12959 904 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 TEAD2Q15562 447 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 FAM45BPQ6NSW5 357 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 AFTPHQ6ULP2 937 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 METTL3Q86U44 580 aaKnown RBP25.04■■□□□ 1.6
CTSA-203ENST00000372459 OR4K2Q8NGD2 314 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 FAM45AQ8TCE6 357 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 USP13Q92995 863 aaPredicted RBP25.04■■□□□ 1.6
CTSA-203ENST00000372459 KLHL29Q96CT2 875 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 XPR1Q9UBH6 696 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 CLEC4EQ9ULY5 219 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 CCL26Q9Y258 94 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 PALM2-AKAP2B1ALY0 433 aaPredicted RBP25.04■■□□□ 1.6
CTSA-203ENST00000372459 RHOP08100 348 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 SBK3P0C264 359 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 HOXB8P17481 243 aaPredicted RBP25.04■■□□□ 1.6
CTSA-203ENST00000372459 LPOP22079 712 aaPredicted RBP25.04■■□□□ 1.6
CTSA-203ENST00000372459 FAM83EQ2M2I3 478 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 ATXN7L2Q5T6C5 722 aaPredicted RBP25.04■■□□□ 1.6
CTSA-203ENST00000372459 LIPMQ5VYY2 423 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 MRPL46Q9H2W6 279 aaKnown RBP25.04■■□□□ 1.6
CTSA-203ENST00000372459 FAM96AQ9H5X1 160 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 GPAMQ9HCL2 828 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 SAR1AQ9NR31 198 aa25.04■■□□□ 1.6
CTSA-203ENST00000372459 TARM1B6A8C7 271 aa25.03■■□□□ 1.6
CTSA-203ENST00000372459 K7ERQ8 282 aa25.03■■□□□ 1.6
CTSA-203ENST00000372459 ATP5BP06576 529 aaKnown RBP25.03■■□□□ 1.6
CTSA-203ENST00000372459 IRS1P35568 1242 aa25.03■■□□□ 1.6
CTSA-203ENST00000372459 PLEKHG6Q3KR16 790 aa25.03■■□□□ 1.6
CTSA-203ENST00000372459 PNPLA1Q8N8W4 532 aa25.03■■□□□ 1.6
CTSA-203ENST00000372459 LEMD2Q8NC56 503 aa25.03■■□□□ 1.6
CTSA-203ENST00000372459 MRPL57Q9BQC6 102 aaKnown RBP25.03■■□□□ 1.6
CTSA-203ENST00000372459 HACD3Q9P035 362 aa25.03■■□□□ 1.6
CTSA-203ENST00000372459 FZD6O60353 706 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 XYLBO75191 536 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 MOSPD3O75425 235 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 PMLP29590 882 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 CD70P32970 193 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 AGAP9Q5VTM2 703 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 ASRGL1Q7L266 308 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 SPATA6LQ8N4H0 392 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 HEXDCQ8WVB3 486 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 TM6SF2Q9BZW4 377 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 STN1Q9H668 368 aaKnown RBP25.02■■□□□ 1.6
CTSA-203ENST00000372459 ARHGEF3Q9NR81 526 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 IGSF5Q9NSI5 407 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 ABCB8Q9NUT2 735 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 INTS10Q9NVR2 710 aaKnown RBP25.02■■□□□ 1.6
CTSA-203ENST00000372459 CRYL1Q9Y2S2 319 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 NUMBLQ9Y6R0 609 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 LAMA2P24043 3122 aaKnown RBP25.02■■□□□ 1.6
CTSA-203ENST00000372459 SOBPA7XYQ1 873 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 RB1P06400 928 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 HNRNPA1P09651 372 aaKnown RBP eCLIP25.02■■□□□ 1.6
CTSA-203ENST00000372459 LTA4HP09960 611 aaKnown RBP25.02■■□□□ 1.6
CTSA-203ENST00000372459 TARSP26639 723 aaKnown RBP25.02■■□□□ 1.6
CTSA-203ENST00000372459 ARRB2P32121 409 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 ABL2P42684 1182 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 STC1P52823 247 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 PLK1P53350 603 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 EPHB1P54762 984 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 CSHL1Q14406 222 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 SEMA3AQ14563 771 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 TYSND1Q2T9J0 566 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 HSF5Q4G112 596 aaPredicted RBP25.02■■□□□ 1.6
CTSA-203ENST00000372459 NAPRTQ6XQN6 538 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 EFHBQ8N7U6 833 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 PCDHB9Q9Y5E1 797 aa25.02■■□□□ 1.6
CTSA-203ENST00000372459 GRM6O15303 877 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 HSPA4LO95757 839 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 SLC4A1P02730 911 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 EPCAMP16422 314 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 MAPK8P45983 427 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 KCNJ2P63252 427 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 CAMK1Q14012 370 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 ARMC12Q5T9G4 340 aa25.01■■□□□ 1.59
CTSA-203ENST00000372459 KLC3Q6P597 504 aa25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms