RNA–Protein interactions for RNA: ENST00000372067.7

VEGFA-205, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 3,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-205ENST00000372067 TMEM233B4DJY2 109 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 RHOCP08134 193 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 TWF1Q12792 350 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 ZNF177Q13360 481 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-205ENST00000372067 TSTD2Q5T7W7 516 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 TMEM198Q66K66 360 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 DEFB118Q96PH6 123 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 SORT1Q99523 831 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 CREBZFQ9NS37 354 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 NDE1Q9NXR1 346 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 ADAM23O75077 832 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 GLP2RO95838 553 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 GABRB3P28472 473 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 DSC1Q08554 894 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 PRKAA1Q13131 559 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 PDAP1Q13442 181 aaKnown RBP17.13■□□□□ 0.33
VEGFA-205ENST00000372067 TSPAN17Q96FV3 270 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.13■□□□□ 0.333e-7■■■■□ 24.7
VEGFA-205ENST00000372067 NCKIPSDQ9NZQ3 722 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 A0A0D9SEW6 157 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 GFAPP14136 432 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 AP2B1P63010 937 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 ELAVL2Q12926 359 aaKnown RBP17.13■□□□□ 0.33
VEGFA-205ENST00000372067 STXBP5Q5T5C0 1151 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 ZYG11AQ6WRX3 759 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 TMEM173Q86WV6 379 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-205ENST00000372067 LPCAT1Q8NF37 534 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 PYDC1Q8WXC3 89 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 ZNF419Q96HQ0 510 aaPredicted RBP17.13■□□□□ 0.33
VEGFA-205ENST00000372067 ARHGAP26Q9UNA1 814 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 ARL5AQ9Y689 179 aa17.13■□□□□ 0.33
VEGFA-205ENST00000372067 SLC38A8A6NNN8 435 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 G3V2L1 256 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 DLX3O60479 287 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 SLC35E2BP0CK96 405 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 TFEBP19484 476 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 MSX2P35548 267 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 ALDH1A3P47895 512 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 NDST2P52849 883 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 CDK18Q07002 472 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 HSF5Q4G112 596 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 CCSAPQ6IQ19 270 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 TMEM214Q6NUQ4 689 aaKnown RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 ANKS3Q6ZW76 656 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 LRRC49Q8IUZ0 686 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 FNDC8Q8TC99 324 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 USP13Q92995 863 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 CRISPLD1Q9H336 500 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 OXSMQ9NWU1 459 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 TRPM5Q9NZQ8 1165 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 ITM2BQ9Y287 266 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 ZNF638Q14966 1978 aaKnown RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 SCN10AQ9Y5Y9 1956 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 HDAC3O15379 428 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 OXSR1O95747 527 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 CST5P28325 142 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 TBL3Q12788 808 aaKnown RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 FBXO48Q5FWF7 155 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 LAYNQ6UX15 382 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 LINGO4Q6UY18 593 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 TAS2R42Q7RTR8 314 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 CARNMT1Q8N4J0 409 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 FBXO22Q8NEZ5 403 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 MAPK15Q8TD08 544 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 OSBPL10Q9BXB5 764 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 PCDH10Q9P2E7 1040 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 DNMT3LQ9UJW3 386 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 FAM50BQ9Y247 325 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 ZFP37Q9Y6Q3 630 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 TRAFD1O14545 582 aaPredicted RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 NBNO60934 754 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 IGLV3-25P01717 112 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 COX4I1P13073 169 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 ARRB2P32121 409 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 HTR7P34969 479 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 SIRPB2Q5JXA9 342 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 OR13C4Q8NGS5 318 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 CCDC106Q9BWC9 280 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 RABL2BQ9UNT1 228 aa17.12■□□□□ 0.33
VEGFA-205ENST00000372067 FAM32AQ9Y421 112 aaKnown RBP17.12■□□□□ 0.33
VEGFA-205ENST00000372067 NCF1BA6NI72 391 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 NCF1CA8MVU1 366 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 H2AFYO75367 372 aaKnown RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 NDUFS3O75489 264 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 NCF1P14598 390 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 NME5P56597 212 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 KLF10Q13118 480 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 TMEM259Q4ZIN3 620 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 RABGAP1LQ5R372 815 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 GPR158Q5T848 1215 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 TMCO4Q5TGY1 634 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 HECTD2Q5U5R9 776 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 DENND5AQ6IQ26 1287 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 RAB44Q7Z6P3 723 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 PIM3Q86V86 326 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 DNAJC28Q9NX36 388 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 ADA2Q9NZK5 511 aa17.11■□□□□ 0.33
VEGFA-205ENST00000372067 UBA2Q9UBT2 640 aaPredicted RBP17.11■□□□□ 0.33
VEGFA-205ENST00000372067 ZDHHC2Q9UIJ5 367 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms