RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 SP140LQ9H930 580 aa12.41□□□□□ -0.42
RAP1A-202ENST00000369709 TOR4AQ9NXH8 423 aa12.41□□□□□ -0.42
RAP1A-202ENST00000369709 CNTN3Q9P232 1028 aa12.41□□□□□ -0.42
RAP1A-202ENST00000369709 RABL2AQ9UBK7 228 aaPredicted RBP12.41□□□□□ -0.42
RAP1A-202ENST00000369709 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ASB14A6NK59 587 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ADAM23O75077 832 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 TOMM70O94826 608 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 TXNP10599 105 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ERCC2P18074 760 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 TXNL4AP83876 142 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 NRG1Q02297 640 aaPredicted RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 EPS8Q12929 822 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SPP2Q13103 211 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 PLEKHG7Q6ZR37 379 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 LUZP2Q86TE4 346 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SLC15A3Q8IY34 581 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 BLOC1S5Q8TDH9 187 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SIGLEC10Q96LC7 697 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 FIZ1Q96SL8 496 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SMAD5Q99717 465 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 RMND5AQ9H871 391 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 INTS10Q9NVR2 710 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 GJA3Q9Y6H8 435 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SLC2A4P14672 509 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 GRIK1P39086 918 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 LAPTM5Q13571 262 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SYT16Q17RD7 645 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 PPP4R4Q6NUP7 873 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 DEFB106AQ8N104 65 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 DEPDC4Q8N2C3 294 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 PACRGLQ8N7B6 248 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 P2RX7Q99572 595 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ZNF556Q9HAH1 456 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SLC38A7Q9NVC3 462 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 TIAM2Q8IVF5 1701 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 BCL9O00512 1426 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SAGE2PA6NJ88 616 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 EFCAB9A8MZ26 197 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ANXA9O76027 345 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 GPIP06744 558 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 CD247P20963 164 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 IDH2P48735 452 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 CLCQ05315 142 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 APOFQ13790 326 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 MXD4Q14582 209 aaPredicted RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 PODNQ7Z5L7 613 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ALDH16A1Q8IZ83 802 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 TTC39CQ8N584 583 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SNX19Q92543 992 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ZNF486Q96H40 463 aaPredicted RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 IL22Q9GZX6 179 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 KLHL3Q9UH77 587 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 INVSQ9Y283 1065 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 TMEM98Q9Y2Y6 226 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 AAR2Q9Y312 384 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SLC22A2O15244 555 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 AIREO43918 545 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ABCB7O75027 752 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 GCATO75600 419 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SUPT20HL2P0C7V6 817 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 CD83Q01151 205 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 ZNF252P-AS1Q0IIN9 211 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 SUPT20HL1Q3ZLR7 823 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 APOBEC3HQ6NTF7 200 aaKnown RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 CHPT1Q8WUD6 406 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 FAM167AQ96KS9 214 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 TBL1YQ9BQ87 522 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 FUNDC2Q9BWH2 189 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 GIMAP2Q9UG22 337 aa12.4□□□□□ -0.42
RAP1A-202ENST00000369709 LEF1Q9UJU2 399 aaPredicted RBP12.4□□□□□ -0.42
RAP1A-202ENST00000369709 NOS1APO75052 506 aaPredicted RBP12.39□□□□□ -0.43
RAP1A-202ENST00000369709 FARP2O94887 1054 aaPredicted RBP12.39□□□□□ -0.43
RAP1A-202ENST00000369709 ANXA6P08133 673 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 ACO1P21399 889 aaKnown RBP12.39□□□□□ -0.43
RAP1A-202ENST00000369709 MATN1P21941 496 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 NMBRP28336 390 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 SEMA5AQ13591 1074 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
RAP1A-202ENST00000369709 TRIQKQ629K1 86 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 UGT3A1Q6NUS8 523 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 SLC39A4Q6P5W5 647 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 GCNT7Q6ZNI0 430 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 CCDC149Q6ZUS6 474 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 EFL1Q7Z2Z2 1120 aaKnown RBP12.39□□□□□ -0.43
RAP1A-202ENST00000369709 MILR1Q7Z6M3 343 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 ZFP90Q8TF47 636 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 TPD52L3Q96J77 140 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 ZNF597Q96LX8 424 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 CSPG4P5Q96PW8 444 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 KCTD15Q96SI1 283 aaPredicted RBP12.39□□□□□ -0.43
RAP1A-202ENST00000369709 CHCHD6Q9BRQ6 235 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 TMEM246Q9BRR3 403 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 BEX2Q9BXY8 128 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 AS3MTQ9HBK9 375 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 RGS18Q9NS28 235 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 COQ3Q9NZJ6 369 aa12.39□□□□□ -0.43
RAP1A-202ENST00000369709 CNOT11Q9UKZ1 510 aaKnown RBP12.39□□□□□ -0.43
RAP1A-202ENST00000369709 HES2Q9Y543 173 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms