RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ARHGAP17Q68EM7 881 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 LAYNQ6UX15 382 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 LARP4Q71RC2 724 aaKnown RBP eCLIP10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 PDZD4Q76G19 769 aaPredicted RBP10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 PTRH1Q86Y79 214 aaKnown RBP10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 ANKRD13BQ86YJ7 626 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 SPPL2CQ8IUH8 684 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 TMEM192Q8IY95 271 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 PYROXD2Q8N2H3 581 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 CCNYQ8ND76 341 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 PTCD2Q8WV60 388 aaKnown RBP10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 CYP2S1Q96SQ9 504 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 TRMOQ9BU70 441 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 ZNF408Q9H9D4 720 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 FAM49BQ9NUQ9 324 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 ANKMY1Q9P2S6 941 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 TRHDEQ9UKU6 1024 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 MAGED2Q9UNF1 606 aaPredicted RBP10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 TRAF6Q9Y4K3 522 aa10.56□□□□□ -0.72
LYSMD1-201ENST00000368908 PLXNA1Q9UIW2 1896 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 TCRBV5S2A0A599 114 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 FAM149AA5PLN7 773 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 DCLK1O15075 740 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 PSMD3O43242 534 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 CLIC3O95833 236 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 TGM1P22735 817 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 LEPRP48357 1165 aaKnown RBP10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 CD300CQ08708 224 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 TRIM32Q13049 653 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 OLIG2Q13516 323 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 SKIV2LQ15477 1246 aaKnown RBP10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 STXBP2Q15833 593 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 KCNJ8Q15842 424 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 KYAT1Q16773 422 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 TECRLQ5HYJ1 363 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 CUZD1Q86UP6 607 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 RETREG3Q86VR2 466 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 FUNDC1Q8IVP5 155 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 KLHDC8BQ8IXV7 354 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 C12orf29Q8N999 325 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 FKBP10Q96AY3 582 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 UBXN10Q96LJ8 280 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 CSF3RQ99062 836 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 MLPHQ9BV36 600 aaPredicted RBP10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 LHPPQ9H008 270 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 RALGAPA2Q2PPJ7 1873 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 FAM95CA0A1B0GW59 222 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 FXYD1O00168 92 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 NRP1O14786 923 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 SPTLC1O15269 473 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 NCAM2O15394 837 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 USP12O75317 370 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 LDLRP01130 860 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 ALBP02768 609 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 NTRK1P04629 796 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 STAG3L1P0CL83 205 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 NMBRP28336 390 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 AXLP30530 894 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 OXTRP30559 389 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 AVPR1AP37288 418 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 ETFBP38117 255 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 ACADSBP45954 432 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 BFSP2Q13515 415 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 TMEM132DQ14C87 1099 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 PPP1R3AQ16821 1122 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 SOWAHAQ2M3V2 549 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 LINC00523Q86TU6 105 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 SAPCD2Q86UD0 394 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 NT5DC4Q86YG4 428 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 CPB2Q96IY4 423 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 SLC39A3Q9BRY0 314 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 B3GNT5Q9BYG0 378 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 ACAD9Q9H845 621 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 RMND5AQ9H871 391 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 CHRAC1Q9NRG0 131 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 MAP10Q9P2G4 905 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 GMPR2Q9P2T1 348 aaKnown RBP10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 KLHL3Q9UH77 587 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 ENPP5Q9UJA9 477 aa10.55□□□□□ -0.72
LYSMD1-201ENST00000368908 ZFC3H1O60293 1989 aaKnown RBP10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 CITO14578 2027 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 C16orf96A6NNT2 1141 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 FAM47E-STBD1D6RA91 191 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 B4GALT5O43286 388 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 FARP2O94887 1054 aaPredicted RBP10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 AHSGP02765 367 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 HNRNPLP14866 589 aaKnown RBP eCLIP10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 PCYT1AP49585 367 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 CDH17Q12864 832 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 PITRM1Q5JRX3 1037 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 INTS6LQ5JSJ4 861 aaKnown RBP10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 NAPEPLDQ6IQ20 393 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 SLC22A9Q8IVM8 553 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 CEP97Q8IW35 865 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 PIK3C3Q8NEB9 887 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 TRIB2Q92519 343 aa10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 HDAC2Q92769 488 aaKnown RBP10.54□□□□□ -0.72
LYSMD1-201ENST00000368908 VAT1Q99536 393 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms