RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 ALG14Q96F25 216 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 IMP4Q96G21 291 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 SPACA7Q96KW9 195 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 ATP6V1G3Q96LB4 118 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 PRICKLE1Q96MT3 831 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 SPSB2Q99619 263 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 EBNA1BP2Q99848 306 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 SLC2A11Q9BYW1 496 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 IL22Q9GZX6 179 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 MRM3Q9HC36 420 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 GLOD4Q9HC38 313 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 ATP13A1Q9HD20 1204 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 SPHK2Q9NRA0 654 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 NDFIP2Q9NV92 336 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 DNAJC17Q9NVM6 304 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 MOCS1Q9NZB8 636 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 MPP6Q9NZW5 540 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 SENP1Q9P0U3 644 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 KLHL8Q9P2G9 620 aaPredicted RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 TSR3Q9UJK0 312 aaKnown RBP8.88□□□□□ -0.99
SNX27-201ENST00000368838 ZNF180Q9UJW8 692 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 RIMKLBQ9ULI2 386 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 CYP8B1Q9UNU6 501 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 OR51B4Q9Y5P0 310 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 SNX10Q9Y5X0 201 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 CACNA1GO43497 2377 aa8.88□□□□□ -0.99
SNX27-201ENST00000368838 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 TCRBV7S3A2A0A539 114 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 WASH3PC4AMC7 463 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 PRRT4C9JH25 899 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 KCNK1O00180 336 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 HOXC11O43248 304 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 LZTS3O60299 673 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 ZMPSTE24O75844 475 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 LUC7L3O95232 432 aaKnown RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 PENKP01210 267 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 TYRP14679 529 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 CR2P20023 1033 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 ADRA1AP35348 466 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 EIF2DP41214 584 aaKnown RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 TNFRSF4P43489 277 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 GEMP55040 296 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 LSM11P83369 360 aaKnown RBP eCLIP8.87□□□□□ -0.991e-6■■■■■ 28.9
SNX27-201ENST00000368838 RPL6Q02878 288 aaKnown RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 CDH17Q12864 832 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 DNAJC3Q13217 504 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 ZNF177Q13360 481 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 KLHL38Q2WGJ6 581 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 OXLD1Q5BKU9 147 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 LYSMD4Q5XG99 296 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 KIAA0907Q7Z7F0 614 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 PRUNE1Q86TP1 453 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 C11orf74Q86VG3 221 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 CACUL1Q86Y37 369 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 TP53INP2Q8IXH6 220 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 CHPFQ8IZ52 775 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 LGI2Q8N0V4 545 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 ARFGAP2Q8N6H7 521 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.87□□□□□ -0.99
SNX27-201ENST00000368838 DCAF4L2Q8NA75 395 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 ARMC2Q8NEN0 867 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 UBLCP1Q8WVY7 318 aaPredicted RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 TMA16Q96EY4 203 aaKnown RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 HMCESQ96FZ2 354 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 LMLNQ96KR4 655 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 GDAP1L1Q96MZ0 367 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 RANBP9Q96S59 729 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 CYTH2Q99418 400 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 MGME1Q9BQP7 344 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 GORASP1Q9BQQ3 440 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 GTPBP2Q9BX10 602 aaKnown RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 C10orf88Q9H8K7 445 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 SSU72Q9NP77 194 aaKnown RBP8.87□□□□□ -0.99
SNX27-201ENST00000368838 CACNA2D2Q9NY47 1150 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 PSD3Q9NYI0 1048 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 WDFY3Q8IZQ1 3526 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 CABIN1Q9Y6J0 2220 aa8.87□□□□□ -0.99
SNX27-201ENST00000368838 FAM237BA0A1B0GVD1 139 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 SPAARA0A1B0GVQ0 90 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 LOC285095A0A1B0GVY8 99 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 A0A1W2PQF6 199 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 RASGRF2O14827 1237 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 JCHAINP01591 159 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 ENGP17813 658 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 PGAM1P18669 254 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 PSMB4P28070 264 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 STX2P32856 288 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 IRAK1P51617 712 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 GPX6P59796 221 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 SKOR1P84550 965 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 TAGLNQ01995 201 aaKnown RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 LAMB3Q13751 1172 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 CEP85LQ5SZL2 805 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 FNBP1LQ5T0N5 605 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 KIAA1324Q6UXG2 1013 aaKnown RBP8.86□□□□□ -0.99
SNX27-201ENST00000368838 SYT12Q8IV01 421 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 ZBED8Q8IZ13 594 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 FBXO36Q8NEA4 188 aa8.86□□□□□ -0.99
SNX27-201ENST00000368838 ARRDC2Q8TBH0 407 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms