RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 PACS1Q6VY07 963 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 KRT73Q86Y46 540 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 MCMBPQ9BTE3 642 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 FAIM2Q9BWQ8 316 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 GLOD4Q9HC38 313 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ATAD3AQ9NVI7 634 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 DUS2Q9NX74 493 aaKnown RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 PCDHGC4Q9Y5F7 938 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 GLYATL1P3A0A0U1RQE8 302 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 B4GALT4O60513 344 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 MLYCDO95822 493 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 HIST1H2ABP04908 130 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 CXCR2P25025 360 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 RTP1P59025 263 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ATP1A4Q13733 1029 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 TRIM71Q2Q1W2 868 aaKnown RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ARMCX4Q5H9R4 360 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 HIST3H2AQ7L7L0 130 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ARMC8Q8IUR7 673 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 HIST1H2ACQ93077 130 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 MRPL57Q9BQC6 102 aaKnown RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 EGFL7Q9UHF1 273 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 MYBPHLA2RUH7 354 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 SNRPB2P08579 225 aaKnown RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ARL2P36404 184 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 MAGEA10P43363 369 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 CXCR3P49682 368 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 EPS8Q12929 822 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 PRKG2Q13237 762 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 TSNQ15631 228 aaKnown RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF544Q6NX49 715 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 NELL1Q92832 810 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 HMCESQ96FZ2 354 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 PANX1Q96RD7 426 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 SH3GL3Q99963 347 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 CHRAC1Q9NRG0 131 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ADRA1BP35368 520 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 SF1Q15637 639 aaKnown RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 BRMS1LQ5PSV4 323 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 CLVS1Q8IUQ0 354 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 BCAS3Q9H6U6 928 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 SGK2Q9HBY8 427 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 PSME2Q9UL46 239 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 PCDHA2Q9Y5H9 948 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 MAFBQ9Y5Q3 323 aaPredicted RBP12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ATRNO75882 1429 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 LOC100506127A0A0U1RQW1 187 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 FGRP09769 529 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ALAS2P22557 587 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 SQLEQ14534 574 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 RBFAQ8N0V3 343 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 CKAP2Q8WWK9 683 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF232Q9UNY5 417 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 DERAQ9Y315 318 aa12.92□□□□□ -0.34
PTPRK-207ENST00000368226 GTPBP1O00178 669 aaKnown RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 KPNA5O15131 536 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 FGF1P05230 155 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SNHG28P0DPA3 235 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 RALGDSQ12967 914 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 MPPE1Q53F39 396 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 LCLAT1Q6UWP7 414 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 KRT77Q7Z794 578 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 IZUMO1Q8IYV9 350 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 BPIFB6Q8NFQ5 453 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 DQX1Q8TE96 717 aaKnown RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 FAM237AA0A1B0GTK4 181 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SCN2BO60939 215 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 AQP1P29972 269 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 MPP1Q00013 466 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 VARS2Q5ST30 1063 aaKnown RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SLAIN1Q8ND83 568 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF398Q8TD17 642 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 STARD8Q92502 1023 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 BCL2L14Q9BZR8 327 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 REXO4Q9GZR2 422 aaKnown RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 VWA7Q9Y334 891 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 ARIH1Q9Y4X5 557 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 IQCMA0A1B0GVH7 501 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 ZBTB48P10074 688 aaPredicted RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 CYP4B1P13584 511 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 LYPLAL1Q5VWZ2 237 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 ZNF549Q6P9A3 640 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 TAC4Q86UU9 113 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 SCAIQ8N9R8 606 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 RAD51AP1Q96B01 352 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 TEKT5Q96M29 485 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 NPAS2Q99743 824 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 GTF2IRD1Q9UHL9 959 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 ANGPT4Q9Y264 503 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 REXO2Q9Y3B8 237 aaKnown RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 CPQQ9Y646 472 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 BCLAF3A2AJT9 711 aaKnown RBP12.91□□□□□ -0.34
PTPRK-207ENST00000368226 TRIM24O15164 1050 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 OTCP00480 354 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 GSTM5P46439 218 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 DUPD1Q68J44 220 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 NPAS4Q8IUM7 802 aa12.91□□□□□ -0.34
PTPRK-207ENST00000368226 PHYKPLQ8IUZ5 450 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms