RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 MRPL57Q9BQC6 102 aaKnown RBP11.62□□□□□ -0.55
SYNE1-204ENST00000367248 NMUR1Q9HB89 426 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 KRT84Q9NSB2 600 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 TMCO1Q9UM00 188 aa11.62□□□□□ -0.55
SYNE1-204ENST00000367248 DCXO43602 365 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 NTRK1P04629 796 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 ALDH4A1P30038 563 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 ZBTB17Q13105 803 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 LPAL2Q16609 132 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 ZDHHC20Q5W0Z9 365 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 OR4K2Q8NGD2 314 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 TPD52L3Q96J77 140 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 KXD1Q9BQD3 176 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CASZ1Q86V15 1759 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 C10orf71Q711Q0 1435 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 OR2AG2A6NM03 316 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 HS6ST1O60243 411 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 BST1Q10588 318 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 MINDY4Q4G0A6 757 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 SCAMP5Q8TAC9 235 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 LMLNQ96KR4 655 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 SLC25A51Q9H1U9 297 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 KCNK4Q9NYG8 393 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CNTN3Q9P232 1028 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 PFDN1O60925 122 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 TLX1P31314 330 aaPredicted RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CSTF3Q12996 717 aaKnown RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 RCN1Q15293 331 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 TXNDC8Q6A555 127 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CYB5D2Q8WUJ1 264 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 TWNKQ96RR1 684 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 OSBPL10Q9BXB5 764 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 PRRG4Q9BZD6 226 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 NOD2Q9HC29 1040 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 SNX15Q9NRS6 342 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 TBC1D30Q9Y2I9 924 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 KCNE2Q9Y6J6 123 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 IRAK2O43187 625 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CDK14O94921 469 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 DSC2Q02487 901 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 GAD2Q05329 585 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 DNAJB7Q7Z6W7 309 aaPredicted RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 JSRP1Q96MG2 331 aaPredicted RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 KCTD14Q9BQ13 255 aaPredicted RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 TMEM175Q9BSA9 504 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 SDCBP2Q9H190 292 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 SNX6Q9UNH7 406 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 TCRBV7S2A1N4TA0A589 114 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 PPEF2O14830 753 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 INPPL1O15357 1258 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 UNGP13051 313 aaPredicted RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CORO7P57737 925 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 KLC1Q07866 573 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 PRMT9Q6P2P2 845 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 SCIMPQ6UWF3 145 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 FAM129CQ86XR2 697 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 RAVER1Q8IY67 606 aaKnown RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 OR52K2Q8NGK3 314 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CKAP2Q8WWK9 683 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 GLYATL1P3A0A0U1RQE8 302 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 LRRC14BA6NHZ5 514 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 RPP40O75818 363 aaKnown RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 POMZP3Q6PJE2 187 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 ZNF621Q6ZSS3 439 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 IPCEF1Q8WWN9 437 aaPredicted RBP11.61□□□□□ -0.55
SYNE1-204ENST00000367248 CPT1BQ92523 772 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 SLC38A3Q99624 504 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 GPR88Q9GZN0 384 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 OSER1Q9NX31 292 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 ZSCAN32Q9NX65 697 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 HMGXB4Q9UGU5 601 aa11.61□□□□□ -0.55
SYNE1-204ENST00000367248 MATN3O15232 486 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 ATG7O95352 703 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 MLYCDO95822 493 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CD48P09326 243 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 PKMP14618 531 aaKnown RBP11.6□□□□□ -0.55
SYNE1-204ENST00000367248 ATP6V1B2P21281 511 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 FRG1Q14331 258 aaKnown RBP11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CYB5D1Q6P9G0 228 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CCDC159P0C7I6 412 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 COX7A2P14406 83 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CDH3P22223 829 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 TRMT5Q32P41 509 aaKnown RBP11.6□□□□□ -0.55
SYNE1-204ENST00000367248 ARCQ7LC44 396 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CMC1Q7Z7K0 106 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 ANKRD49Q8WVL7 239 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 TCF3P15923 654 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 SCNN1AP37088 669 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CTSOP43234 321 aaPredicted RBP11.6□□□□□ -0.55
SYNE1-204ENST00000367248 HADHBP55084 474 aaKnown RBP11.6□□□□□ -0.55
SYNE1-204ENST00000367248 GSTA3Q16772 222 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 SLC39A4Q6P5W5 647 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 IYDQ6PHW0 289 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CDYL2Q8N8U2 506 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 SPPL2AQ8TCT8 520 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 RNF31Q96EP0 1072 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CCDC167Q9P0B6 97 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 SALL4Q9UJQ4 1053 aa11.6□□□□□ -0.55
SYNE1-204ENST00000367248 CA14Q9ULX7 337 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms