RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 TRAF2Q12933 501 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 TGFBIQ15582 683 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 RABL3Q5HYI8 236 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 GPR158Q5T848 1215 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 NANOGP8Q6NSW7 305 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 IFNLR1Q8IU57 520 aaPredicted RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 SLC15A3Q8IY34 581 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 OR52K2Q8NGK3 314 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 DNAJB14Q8TBM8 379 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 SGCDQ92629 289 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 HDAC10Q969S8 669 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 COLEC11Q9BWP8 271 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 ELP3Q9H9T3 547 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 NDFIP2Q9NV92 336 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 CMTM6Q9NX76 183 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 FBXW11Q9UKB1 542 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 TRHDEQ9UKU6 1024 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 SARDHQ9UL12 918 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 CORINQ9Y5Q5 1042 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 THSD7BQ9C0I4 1608 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 H3BMM5 538 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 K7EPI3 171 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 PIRO00625 290 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 FUCA1P04066 466 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 STX1BP61266 288 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 ECT2LQ008S8 904 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 GRIK4Q16099 956 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 UGP2Q16851 508 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 OTUD3Q5T2D3 398 aaPredicted RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 NEPROQ6NW34 567 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 SLC27A1Q6PCB7 646 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 C16orf87Q6PH81 154 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 DHRS4L2Q6PKH6 230 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 KCTD8Q6ZWB6 473 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 BNIPLQ7Z465 357 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 CAMK1DQ8IU85 385 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 DDIASQ8IXT1 998 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 ZBTB8BQ8NAP8 495 aaPredicted RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 TBC1D15Q8TC07 691 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 VPS33AQ96AX1 596 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 SLC10A4Q96EP9 437 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 NSUN5Q96P11 429 aaKnown RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 SLC2A13Q96QE2 648 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 SEPHS2Q99611 448 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 MTG1Q9BT17 334 aaPredicted RBP13.62□□□□□ -0.23
PRKN-205ENST00000366897 HIPK3Q9H422 1215 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 GSTO2Q9H4Y5 243 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 WDCPQ9H6R7 721 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 VPS45Q9NRW7 570 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 FADS3Q9Y5Q0 445 aa13.62□□□□□ -0.23
PRKN-205ENST00000366897 EEF1B2P24534 225 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 C21orf59P57076 290 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 PFKPQ01813 784 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 KYAT1Q16773 422 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 CYP51A1Q16850 503 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 ARMCX2Q7L311 632 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 ZC3H7AQ8IWR0 971 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 PPHLN1Q8NEY8 458 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 TNIP3Q96KP6 325 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 FSD1LQ9BXM9 530 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 CCM2LQ9NUG4 571 aaPredicted RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 TBC1D23Q9NUY8 699 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 RBPJLQ9UBG7 517 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 NUDT5Q9UKK9 219 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 PIN4Q9Y237 131 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 CRYL1Q9Y2S2 319 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 ZFC3H1O60293 1989 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 A0A1B0GTL3 188 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 CYP2C9P11712 490 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 MYF6P23409 242 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 ELK4P28324 431 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 RXRGP48443 463 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 TAF6P49848 677 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 DAOAP59103 153 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 LILRA4P59901 499 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 FRG1Q14331 258 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 UGT3A2Q3SY77 523 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 TMEM207Q6UWW9 146 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 LARP4Q71RC2 724 aaKnown RBP eCLIP13.61□□□□□ -0.23
PRKN-205ENST00000366897 ANKRD13AQ8IZ07 590 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 TOP1MTQ969P6 601 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 C19orf60Q96EN9 201 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 PLEKHA8Q96JA3 519 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 ZFP42Q96MM3 310 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 HNRNPABQ99729 332 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 LTB4R2Q9NPC1 389 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 MRPL40Q9NQ50 206 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 NSMCE4AQ9NXX6 385 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 EVLQ9UI08 416 aaPredicted RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 UBQLN1Q9UMX0 589 aaKnown RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 TCAF1Q9Y4C2 921 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 PCDHGA4Q9Y5G9 962 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 MYBPHLA2RUH7 354 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 FXYD1O00168 92 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 ARPC2O15144 300 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 KPNA6O60684 536 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 OCM2P0CE71 109 aa13.61□□□□□ -0.23
PRKN-205ENST00000366897 OCMP0CE72 109 aaPredicted RBP13.61□□□□□ -0.23
PRKN-205ENST00000366897 GPX3P22352 226 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms