RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 SPRED1Q7Z699 444 aa19.13■□□□□ 0.65
CMTM3-201ENST00000361909 OR13F1Q8NGS4 319 aa19.13■□□□□ 0.65
CMTM3-201ENST00000361909 MAGED4Q96JG8 741 aa19.13■□□□□ 0.65
CMTM3-201ENST00000361909 C11orf84Q9BUA3 381 aaPredicted RBP19.13■□□□□ 0.65
CMTM3-201ENST00000361909 CXCL16Q9H2A7 254 aa19.13■□□□□ 0.65
CMTM3-201ENST00000361909 STARD7Q9NQZ5 370 aa19.13■□□□□ 0.65
CMTM3-201ENST00000361909 VANGL2Q9ULK5 521 aa19.13■□□□□ 0.65
CMTM3-201ENST00000361909 USP3Q9Y6I4 520 aa19.13■□□□□ 0.65
CMTM3-201ENST00000361909 ZCWPW2A0A1B0GU75 182 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 TARM1B6A8C7 271 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 MRASO14807 208 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 GRAP2O75791 330 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 CLPXO76031 633 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 SBK3P0C264 359 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 FASP25445 335 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 GMPRP36959 345 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 CAPGP40121 348 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 DNAJB13P59910 316 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 BNIP3Q12983 259 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 BSPRYQ5W0U4 402 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 PTAR1Q7Z6K3 402 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-201ENST00000361909 LEMD2Q8NC56 503 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 LRRN4Q8WUT4 740 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 CENPNQ96H22 339 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-201ENST00000361909 FEM1CQ96JP0 617 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 MARK4Q96L34 752 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 RHOJQ9H4E5 214 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 AGO3Q9H9G7 860 aaKnown RBP19.12■□□□□ 0.65
CMTM3-201ENST00000361909 PADI3Q9ULW8 664 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 HTTP42858 3142 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 ZNF839A8K0R7 811 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 AP3B1O00203 1094 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 CLOCKO15516 846 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 ZNF623O75123 536 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 PSMA4P25789 261 aaKnown RBP19.12■□□□□ 0.65
CMTM3-201ENST00000361909 RXRGP48443 463 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 ATP6V0D1P61421 351 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 TBCELQ5QJ74 424 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 DEPDC1Q5TB30 811 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 C9orf57Q5W0N0 161 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 KCTD8Q6ZWB6 473 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 MRPL10Q7Z7H8 261 aaKnown RBP19.12■□□□□ 0.65
CMTM3-201ENST00000361909 KCNMB4Q86W47 210 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 TTC30BQ8N4P2 665 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 TANKQ92844 425 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 P2RY11Q96G91 374 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 ATXN7L3BQ96GX2 97 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 ZNF641Q96N77 438 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-201ENST00000361909 KCTD15Q96SI1 283 aaPredicted RBP19.12■□□□□ 0.65
CMTM3-201ENST00000361909 MROQ9BYG7 248 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 MUC13Q9H3R2 512 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 CAB39LQ9H9S4 337 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 TCAF1Q9Y4C2 921 aa19.12■□□□□ 0.65
CMTM3-201ENST00000361909 DHRS12A0PJE2 317 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 ARVCFO00192 962 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 PIRO00625 290 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 AP2A1O95782 977 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 JUNP05412 331 aaKnown RBP19.11■□□□□ 0.65
CMTM3-201ENST00000361909 GNAO1P09471 354 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 GSTT2P0CG29 244 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 GSTT2BP0CG30 244 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 DNAJB2P25686 324 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 PNPLA4P41247 253 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 RALGDSQ12967 914 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 OXA1LQ15070 435 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 DLG2Q15700 870 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 SLC15A4Q8N697 577 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 CANT1Q8WVQ1 401 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 SCYL1Q96KG9 808 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 ZNF347Q96SE7 839 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 HEPHQ9BQS7 1158 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 MEAF6Q9HAF1 191 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 CASS4Q9NQ75 786 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 GIT1Q9Y2X7 761 aa19.11■□□□□ 0.65
CMTM3-201ENST00000361909 SAC3D1A6NKF1 404 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 UBDO15205 165 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 NRP2O60462 931 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 PFKMP08237 780 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 CD247P20963 164 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 ZNF846Q147U1 533 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 UGP2Q16851 508 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 CCNYL2Q5T2Q4 361 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 LCN8Q6JVE9 175 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 ZNF773Q6PK81 442 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 CYP2R1Q6VVX0 501 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 EPHX4Q8IUS5 362 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 KHSRPQ92945 711 aaKnown RBP eCLIP19.1■□□□□ 0.65
CMTM3-201ENST00000361909 C18orf25Q96B23 403 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-201ENST00000361909 TAMM41Q96BW9 452 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 NT5C1AQ9BXI3 368 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 PAK6Q9NQU5 681 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-201ENST00000361909 KLK14Q9P0G3 267 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 TSC22D4Q9Y3Q8 395 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 MTF2Q9Y483 593 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-201ENST00000361909 SEC14L2O76054 403 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 GPIP06744 558 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 TFE3P19532 575 aaPredicted RBP19.1■□□□□ 0.65
CMTM3-201ENST00000361909 NPY2RP49146 381 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 DSC3Q14574 896 aa19.1■□□□□ 0.65
CMTM3-201ENST00000361909 GOLGA7BQ2TAP0 167 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms