RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 FAM83AQ86UY5 434 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 GANCQ8TET4 914 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 GTF3C2Q8WUA4 911 aaPredicted RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 APOBEC3GQ9HC16 384 aaKnown RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 VWA7Q9Y334 891 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 SPTLC1O15269 473 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 NDUFS2O75306 463 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 TSPAN9O75954 239 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 CST3P01034 146 aaPredicted RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 CYP2A7P20853 494 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 CDH13P55290 713 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 NELL1Q92832 810 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 NODALQ96S42 347 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 TDRD1Q9BXT4 1180 aaKnown RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 FAM126AQ9BYI3 521 aaPredicted RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 POLR1EQ9GZS1 481 aaKnown RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 PCDHAC1Q9H158 963 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 ING3Q9NXR8 418 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 RCOR3Q9P2K3 495 aaPredicted RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 MAPRE3Q9UPY8 281 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 DYRK1BQ9Y463 629 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 POLR3HQ9Y535 204 aaPredicted RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 SLC15A5A6NIM6 579 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 MDM4O15151 490 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 TULP3O75386 442 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 IGFBP5P24593 272 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 CYP2C18P33260 490 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 ACADVLP49748 655 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 CLEC6AQ6EIG7 209 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 POTEHQ6S545 545 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 KLHL32Q96NJ5 620 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 TK2O00142 265 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 CBX4O00257 560 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 TMCC2O75069 709 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 PTPN1P18031 435 aaKnown RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 CPT1AP50416 773 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 TUBA4AP68366 448 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 LSAMPQ13449 338 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 THOC7Q6I9Y2 204 aaKnown RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 CAMKK1Q8N5S9 505 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 CHRAC1Q9NRG0 131 aa13.98□□□□□ -0.17
SMC5-201ENST00000361138 MRPL39Q9NYK5 338 aaKnown RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.98□□□□□ -0.17
SMC5-201ENST00000361138 UBA2Q9UBT2 640 aaPredicted RBP13.98□□□□□ -0.17
SMC5-201ENST00000361138 AP2A1O95782 977 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 UBA1P22314 1058 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 RPS12P25398 132 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 RHOAP61586 193 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 COPZ1P61923 177 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 TRIM71Q2Q1W2 868 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 SLC25A52Q3SY17 297 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 MSS51Q4VC12 460 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 DACT2Q5SW24 774 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 RALGPS2Q86X27 583 aaPredicted RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 RAB43Q86YS6 212 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 TMEM126BQ8IUX1 230 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 WDR36Q8NI36 951 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 GBA3Q9H227 469 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 ARMC7Q9H6L4 198 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 ZNF395Q9H8N7 513 aaPredicted RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 ING4Q9UNL4 249 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 PLIN4Q96Q06 1357 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 CILPO75339 1184 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 SLURP2P0DP57 97 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 AIF1P55008 147 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 CDH15P55291 814 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 HECTD2Q5U5R9 776 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 AFTPHQ6ULP2 937 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 NCCRP1Q6ZVX7 275 aaPredicted RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 MPP5Q8N3R9 675 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 CARNMT1Q8N4J0 409 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 GPRC5AQ8NFJ5 357 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 SUN5Q8TC36 379 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 Q96MT0 163 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 MRPL45Q9BRJ2 306 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 CD320Q9NPF0 282 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 EIF2B3Q9NR50 452 aaKnown RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 COQ4Q9Y3A0 265 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 CHRNGP07510 517 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 IRF9Q00978 393 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 BNIP3Q12983 259 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 KCNJ11Q14654 390 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 SAMD7Q7Z3H4 446 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 PACRGLQ8N7B6 248 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 ZNF222Q9UK12 451 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 CASTOR2A6NHX0 329 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 ZNF99A8MXY4 864 aaPredicted RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 GMPSP49915 693 aaPredicted RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 OGFOD2Q6N063 350 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 PPP4R4Q6NUP7 873 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 GLB1LQ6UWU2 654 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 STRADAQ7RTN6 431 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 SVOPLQ8N434 492 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 CERS5Q8N5B7 392 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 SLC7A6OSQ96CW6 309 aaPredicted RBP13.97□□□□□ -0.17
SMC5-201ENST00000361138 ITCHQ96J02 903 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 ADAM7Q9H2U9 754 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 BCAS3Q9H6U6 928 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 ZFP14Q9HCL3 533 aa13.97□□□□□ -0.17
SMC5-201ENST00000361138 SFMBT1Q9UHJ3 866 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms