RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 PCDHGB1Q9Y5G3 927 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 TRUB2O95900 331 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 DEF8Q6ZN54 512 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 ALLCQ8N6M5 410 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 ZNF75CPQ92670 426 aaPredicted RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 NEUROD4Q9HD90 331 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SAMHD1Q9Y3Z3 626 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 ALOX5P09917 674 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 TPH1P17752 444 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SDC2P34741 201 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 GRIA4P48058 902 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 ADARP55265 1226 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 XKR6Q5GH73 641 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 AVL9Q8NBF6 648 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 FAM163AQ96GL9 167 aaPredicted RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 GAD1Q99259 594 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CEP41Q9BYV8 373 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 ZNF222Q9UK12 451 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SPIBQ01892 262 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 TRAP1Q12931 704 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 MAPK11Q15759 364 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 NOMO2Q5JPE7 1267 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 MCEMP1Q8IX19 187 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PANX1Q96RD7 426 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SLC4A5Q9BY07 1137 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PTGFRNQ9P2B2 879 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 MPZL2O60487 215 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SLC22A3O75751 556 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 ADSSP30520 456 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SP3Q02447 781 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 DGCR6Q14129 220 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SEZ6Q53EL9 994 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 LIPMQ5VYY2 423 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 RASSF6Q6ZTQ3 369 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 OTOP1Q7RTM1 612 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 PAIP1Q9H074 479 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 VAPBO95292 243 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 XIAPP98170 497 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CDKAL1Q5VV42 579 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 SNX32Q86XE0 403 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CCDC54Q8NEL0 328 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 METTL21AQ8WXB1 218 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 CDRT15Q96T59 188 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 DCUN1D5Q9BTE7 237 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 NOL6Q9H6R4 1146 aaKnown RBP9.7□□□□□ -0.86
CUX1-203ENST00000360264 PTCH2Q9Y6C5 1203 aa9.7□□□□□ -0.86
CUX1-203ENST00000360264 FAM92AA1XBS5 289 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 AZIN1O14977 448 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 UBXN7O94888 489 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 SERPINA1P01009 418 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CST1P01037 141 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CYP1A2P05177 515 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 AKT2P31751 481 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 FAR1Q8WVX9 515 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CLIP3Q96DZ5 547 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TLE6Q9H808 572 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 SNX4O95219 450 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 FGBP02675 491 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CERS6Q6ZMG9 384 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CLVS1Q8IUQ0 354 aaPredicted RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 SEMA4AQ9H3S1 761 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 ETNK2Q9NVF9 386 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 ZNF37AP17032 561 aaPredicted RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 HSD17B2P37059 387 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 DNASE1L1P49184 302 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PLK1P53350 603 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 VPS26BQ4G0F5 336 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 RHBGQ9H310 441 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 MAGEL2Q9UJ55 1249 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 RPL26L1Q9UNX3 145 aaKnown RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 TIMM13Q9Y5L4 95 aaPredicted RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 H0YJX3 145 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 KMOO15229 486 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 SLC28A2O43868 658 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 IDI2Q9BXS1 227 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 ATXN10Q9UBB4 475 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 E5RJQ4 531 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PER2O15055 1255 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 LAG3P18627 525 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 GSSP48637 474 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CXCR3P49682 368 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PTPRNQ16849 979 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 USP49Q70CQ1 688 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PHF13Q86YI8 300 aaPredicted RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 LRRC17Q8N6Y2 441 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 SEMA4DQ92854 862 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CLIC5Q9NZA1 410 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 PCYOX1Q9UHG3 505 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 BCORL1Q5H9F3 1711 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 ABHD14A-ACY1A0A1B0GW23 586 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TLL1O43897 1013 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 FCHO2Q0JRZ9 810 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 OR2L5Q8NG80 312 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 CALML5Q9NZT1 146 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 GGA2Q9UJY4 613 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 BAZ2AQ9UIF9 1905 aaKnown RBP9.69□□□□□ -0.86
CUX1-203ENST00000360264 EPS8L1Q8TE68 723 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 LOC102724159A0A0B4J2E5 919 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 HDAC3O15379 428 aa9.69□□□□□ -0.86
CUX1-203ENST00000360264 TFPIP10646 304 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms